DRSC/TRiP Functional Genomics Resources

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Protein Alignment w and wht-2

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_502164.1 Gene:wht-2 / 178069 WormBaseID:WBGene00007513 Length:610 Species:Caenorhabditis elegans


Alignment Length:658 Identity:238/658 - (36%)
Similarity:359/658 - (54%) Gaps:53/658 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 ASQSCINQGFGQAKNYGTLRPPSPPEDSGSGSGQLAENLTYAWHNMDIFGAVNQPGSGWRQLVNR 94
            |:::|.....||:: ||...       |...:.:..:.:|..|||:.|                 
 Worm     2 ATETCSLLSVGQSE-YGAAA-------SMISALEAVDPVTLTWHNISI----------------- 41

  Fly    95 TRGLFCNERHIPAPRKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMR 159
                     |.....|.:|:||.|:|.||:|||:||:||||||||||.|..|:.:|::.  ||..
 Worm    42 ---------HAEKSGKQILENVSGIAKPGQLLALMGASGAGKTTLLNMLLSRNLRGLET--SGSV 95

  Fly   160 LLNGQPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSL 224
            .:||..: .:.:.|...|.|||:||:|:||.:|:|..||.:|:......|:|  ||..|:.:|.|
 Worm    96 KVNGHEL-GRGITAISGYAQQDELFVGTLTVKEYLDIQAKLRVNGDSEKRRR--RVGNVMSQLGL 157

  Fly   225 SKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQK 289
            .|||:|.||..|..||:||||.:||.||.|.|::|.:|.|||||:|||||.|.||||||..|::.
 Worm   158 YKCQNTRIGTIGGQKGISGGEMRRLTFACELLSNPSILFCDEPTTGLDSFMAESVVQVLSNLAKS 222

  Fly   290 GKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCPTNYNPADFYVQVLA 354
            |:|||.|||||||:|:.:||:::.||.|:.||||:|.:|:.||...|..||.|:||||..:..||
 Worm   223 GRTVICTIHQPSSQLYLMFDRVMFMAGGKTAFLGSPRDAIQFFEDAGFACPRNFNPADLIIHTLA 287

  Fly   355 VVPGREIESRDRIAKICDNFAISKVARDMEQLLATKNLEKPLEQPENGYTYKATWFMQFRAVLWR 419
            |:|..|.:.|.||..|...|..|...|.::     ..:||..|.......:|.....|..|:|.|
 Worm   288 VMPNEEDKCRQRIEVIYTKFQNSSYGRTLK-----FGVEKSDEGQRPSERHKTGILTQIGALLER 347

  Fly   420 SWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVGVMNINGAIFLFLTNMTFQNVFATINV 484
            |.:...:.|.|.:.::||.:::.:.|||::|...||.:|:.|:|||:|..:..:|:..:|..:|.
 Worm   348 SAIDTWRNPSLTRAKVIQKSIMGLFIGLLYLQSPLTSIGISNLNGALFYLVCELTYSTIFGILNF 412

  Fly   485 FTSELPVFMREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLRAGVLHFFNCLALV 549
            ..::.|:..||....||...:|::.:.::.||||....|:...::|.|:|..:.:........:.
 Worm   413 LPADFPLVSREYHDGLYSVFSYYVARCLSYLPLFTADGLIMLLVSYWMVGFSSSITQVLYACLIA 477

  Fly   550 TLVANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYAN 614
            .|:...|::.|.:|||.|.|..:|:|...|::....|.||.:.|.|::|.|:.|:.|||||||..
 Worm   478 FLIEQSSSACGIMISCISPSLPIAMSTAGPMLTLLSLTGGLYANVGALPSYISWIQYLSWFRYGF 542

  Fly   615 EGLLINQWADVEPGEISCTSSNTTCPSSGK--VILETLNFSAADLPLDYVGLAILIVSFRVLAYL 677
            |...||||:.|       ...|||..:..|  .:|..|:|.|.....|...::..|:.|..:.|.
 Worm   543 EAFAINQWSSV-------NEQNTTIWTDEKRDSVLSQLSFRAEMFYPDLFIMSAFILIFYTIGYA 600

  Fly   678 ALRLRARR 685
            .|.||..:
 Worm   601 GLALRVSK 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 231/620 (37%)
wht-2NP_502164.1 3a01204 44..610 CDD:273361 225/582 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 121 1.000 Domainoid score I3516
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49295
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.730

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