DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment w and wht-7

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001367851.1 Gene:wht-7 / 175864 WormBaseID:WBGene00021535 Length:666 Species:Caenorhabditis elegans


Alignment Length:651 Identity:245/651 - (37%)
Similarity:379/651 - (58%) Gaps:45/651 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 QLAENLTYAWHNMDIFGAVNQPGSGWRQLVNRTRGLF---C----NERHIPAPRKHLLKNVCGVA 120
            :|...:...||::.:..:.....|        ..|||   |    .:....:..|.:|.:|.|||
 Worm    33 ELRPKMLLTWHDISVSDSSEDYSS--------NSGLFGKCCPIKVGDVEKMSVEKRILDSVFGVA 89

  Fly   121 YPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQARCAYVQQDDLFI 185
            .|||:.|::|.||||||||||.|..|:...::.  :|...:||...:...|:..||||||||.||
 Worm    90 RPGEVTAIIGPSGAGKTTLLNVLTKRNLSNLKA--TGSVKVNGIRAERSYMRQVCAYVQQDDCFI 152

  Fly   186 GSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVKGLSGGERKRLA 250
            ||||..|||.|.|.::|.......::..||..|::.|.|.|...:|||...| ||:||||:||||
 Worm   153 GSLTVEEHLKFMAKLKMGSEYDLNEQERRVKSVMRSLGLEKIADSIIGTRTR-KGISGGEKKRLA 216

  Fly   251 FASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQ-KGKTVILTIHQPSSELFELFDKILLM 314
            ||||.||.||:|||||||||||||.|:.||.|||||:: :..|::||||||||::|:|||.|.:|
 Worm   217 FASEILTSPPILICDEPTSGLDSFLAYQVVCVLKKLAETRNMTILLTIHQPSSQVFQLFDSIYMM 281

  Fly   315 AEGRVAFLGTPSEAVDFFSYVGAQCPTNYNPADFYVQVLAV-VPGREIESRDRIAKICDNFAISK 378
            ..|.|||.|:.|.|...:|.:....|.|:||:|.|:..::: ....|...:::|.|||..|..|:
 Worm   282 VNGDVAFCGSQSGAEKMWSEMKLPIPMNFNPSDHYLATMSIRDQAEETLKKNQIGKICTTFKYSE 346

  Fly   379 VARDMEQLLATKNLEKPLEQPENGYT---------------YKATWFMQFRAVLWRSWLSVLKEP 428
            :.:.:.:    ::..:.:::.:..::               :.|::|.|.||:.||:..:||:||
 Worm   347 LGKSVFK----ESSGREVDERDRAFSEDWRRRYATTFGRPRFGASFFQQIRALTWRASKTVLREP 407

  Fly   429 LLVKVRLIQTTMVAILIGLIFLGQQ-LTQVGVMNINGAIFLFLTNMTFQNVFATINVFTSELPVF 492
            .|:||:..|:.::|||.||::.... :.|..:|||||:::..::||.|...|:.::.|..|:..|
 Worm   408 TLLKVQTFQSIIIAILTGLVYTNNSPVDQQKIMNINGSLYQMISNMAFMFQFSVVHHFCLEMNTF 472

  Fly   493 MREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLRAGVLHFFNCLALVTLVANVST 557
            .||..|||||...||:.|.:||||.::...::||:|.|.|.||...:..|...:.:..||.|::.
 Worm   473 YRETSSRLYRVSAYFISKNLAELPSYIVSAVIFTSILYWMSGLVPIIDSFLIYMLVGILVQNIAI 537

  Fly   558 SFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYANEGLLINQW 622
            |.||:.||...:.::|::|.|..::|.:.|||||:|..::..|...:.|||:|.|..|.:.|.||
 Worm   538 SIGYMFSCIFGTVNLAVAVMPIFVVPMMAFGGFFINQDTLQWYFVPMKYLSYFGYGYEAVAIAQW 602

  Fly   623 ADVE--PGEISCTSSNTTCPSSGKVILETLNFSAADLPLDYVGLAILIVSFRVLAYLALRLRARR 685
            ..||  ||   |:||...|..:|..:|.:::|..::..:|...:|.:|..||.||::||.:|.:|
 Worm   603 THVEEIPG---CSSSLAHCSRNGTDVLNSMSFKPSNFWVDISVMAFMIFVFRFLAFMALYVRVKR 664

  Fly   686 K 686
            :
 Worm   665 R 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 244/646 (38%)
wht-7NP_001367851.1 3a01204 40..664 CDD:273361 243/641 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 174 1.000 Domainoid score I2193
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H55852
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49295
OrthoDB 1 1.010 - - D209530at33208
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - otm14401
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.060

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