Protein Alignment w and Abca2

DIOPT Version :9

• Sequence 1: NP_476787.1
• Gene: w / 31271
• FlyBaseID: FBgn0003996
• Length: 687
• Species: Drosophila melanogaster
• Sequence 2: XP_006497672.1
• Gene: Abca2 / 11305
• MGIID: 99606
• Length: 2464
• Species: Mus musculus
• Alignment Length: 288
• Identity: 72/288 - (25%)
• Similarity: 128/288 - (44%)
• Gaps: 26/288 - (9%)

  Fly   116 VCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPV--DAKEMQARCAYV 178
            :|....|||...::|.:|||||:     .|:...|.:.:..|...:||..|  |..::|....|.
Mouse  2104 LCLGVRPGECFGLLGVNGAGKTS-----TFKMLTGDESTTGGEAFVNGHSVLKDLLQVQQSLGYC 2163

  Fly   179 QQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVKGLSG 243
            .|.|.....|||||||  |...|: |.:.::.....|...:::|.|:|......|.      .||
Mouse  2164 PQFDALFDELTAREHL--QLYTRL-RGIPWKDEAQVVKWALEKLELTKYADKPAGT------YSG 2219

  Fly   244 GERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSELFELF 308
            |.:::|:.|...:..|..:..||||:|:|......:..::..|.:.|::|:||.|. ..|...|.
Mouse  2220 GNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSHS-MEECEALC 2283

  Fly   309 DKILLMAEGRVAFLGTPSEAVDFFS---YVGAQCPTNYNPADFYVQVLAVVPGREIESRDRIAKI 370
            .::.:|..||:..||:.....:.|.   .:..:..::.|..|.........|...::.|.. .|:
Mouse  2284 TRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKSSQNVKDVVRFFNRNFPEAMLKERHH-TKV 2347

  Fly   371 -----CDNFAISKVARDMEQLLATKNLE 393
                 .::.::::|...|||::....:|
Mouse  2348 QYQLKSEHISLAQVFSKMEQVVGVLGIE 2375

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
w	NP_476787.1	3a01204	68..687	CDD:273361	72/288 (25%)
Abca2	XP_006497672.1	rim_protein	58..2398	CDD:130324	72/288 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000