DRSC/TRiP Functional Genomics Resources

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Protein Alignment w and abcg1

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:XP_002942182.2 Gene:abcg1 / 100496811 XenbaseID:XB-GENE-996335 Length:664 Species:Xenopus tropicalis


Alignment Length:592 Identity:202/592 - (34%)
Similarity:327/592 - (55%) Gaps:40/592 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 KHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQAR 174
            |.|||.:.|..:.|||.|:||.|||||:||:|.||.....|::    |..|:||||.|.:..:..
 Frog    97 KTLLKGISGKFHCGELAAIMGPSGAGKSTLMNILAGYRETGMK----GEVLINGQPRDLRSFRKV 157

  Fly   175 CAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQ----RVARVDQVIQELSLSKCQHTIIGVP 235
            ..|:.|||:.:..||.:|.::..|      ||..::    |...|.:::..|.|..|..|     
 Frog   158 SCYIMQDDMLLPHLTVQEAMMVSA------HLKLQEKDEGRKEMVKEILTALGLLPCADT----- 211

  Fly   236 GRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQP 300
             |...||||:|||||.|.|.:.:||::..|||||||||.:...||.::|.|:|.|:.:|.|||||
 Frog   212 -RTGSLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSSSCFQVVSLMKSLAQGGRNIICTIHQP 275

  Fly   301 SSELFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCPTNYNPADFYVQVLAVVPGREIESRD 365
            |::||||||::.::::|:..:.|..|..|.:...:|..|||.:|||||   ::.|..|...:...
 Frog   276 SAKLFELFDQLYVLSQGQCIYRGKVSNLVPYLRVLGLNCPTYHNPADF---IMEVASGEYGDQNP 337

  Fly   366 RIAK-ICDNFAISKVARDMEQLLATKNLEKPL------EQP---ENGYTYKATWFMQFRAVLWRS 420
            .:.: :.||....:..||    |..:|.:.||      |.|   |..:::.|:...||..:..|:
 Frog   338 HLVRAVQDNLCEVEPKRD----LCGENEQSPLMWHRPDEDPSPTEGCHSFSASCLTQFCILFKRT 398

  Fly   421 WLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVGVMNINGAIFLFLTNMTFQNVFATINVF 485
            :::::::.:|..:|:.....:.|||||::||.......|::.:|.:|..:..:.|..:..|:..|
 Frog   399 FINIMRDSVLTHLRITSHIGIGILIGLLYLGIGNEAKKVLSNSGFLFFSMLFLMFAALMPTVLTF 463

  Fly   486 TSELPVFMREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLRAGVLHFFNCLALVT 550
            ..|:.||:||..:..|....|:|.||:|::|..:..|:.:.:|.|.|....:..|.|....||.|
 Frog   464 PLEMGVFLREHLNYWYSLKAYYLAKTMADVPFQIMFPVAYCSIVYWMTSQPSDALRFILFAALGT 528

  Fly   551 LVANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYANE 615
            :.:.|:.|.|.||..||:|..:|..|||...||.|||.|||::..::|.||:|:||:|:.||..|
 Frog   529 MTSLVAQSLGLLIGAASTSLQVATFVGPVTAIPVLLFSGFFVSFDTIPSYLQWMSYMSYVRYGFE 593

  Fly   616 GLLINQWADVEPGEISCTSSNTTCPSSGKVILETLNFSAADLPLDYVGLAILIVSFRVLAYLAL- 679
            |::::.:. ::..::.|....|......:.||:.|:...|.|.||::.|.:..|:.|:.||..| 
 Frog   594 GVILSIYG-LDREDLHCEKDETCHFQKSEAILKELDVEDAKLYLDFIILGVFFVTLRLTAYFVLK 657

  Fly   680 -RLRARR 685
             ::||.|
 Frog   658 YKIRAER 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 202/592 (34%)
abcg1XP_002942182.2 3a01204 59..664 CDD:273361 201/590 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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