DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx4 and SYP125

DIOPT Version :9

Sequence 1:NP_525057.2 Gene:Syx4 / 31269 FlyBaseID:FBgn0024980 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_172591.1 Gene:SYP125 / 837666 AraportID:AT1G11250 Length:298 Species:Arabidopsis thaliana


Alignment Length:294 Identity:72/294 - (24%)
Similarity:132/294 - (44%) Gaps:54/294 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 NPYTEIRQQLAQIAANLETMN--RMAQTV---------------NLRTFNENEMDELHN----KN 132
            |.:.:.:.||..:.|..||||  :..:.|               .|:..|| |...:||    |.
plant     7 NSFKKNQAQLGDVEAGQETMNLDKFFEDVENVKDDMKGVEALYKKLQDSNE-ECKTVHNAKKVKE 70

  Fly   133 LRL---GN---------------QLMTRFNDFKANLPAENDYSLEARMKRTLFYGLHQTFINLWH 179
            ||.   |:               :.:.:.|....|:|.....|...|.:.::..||.:...:|..
plant    71 LRAKMDGDVAMVLKRVKIIKQKLEALEKANANSRNVPGCGPGSSTDRTRSSVVSGLGKKLKDLMD 135

  Fly   180 KNELFLQNYETKVKKNL-RLHTKIINSEASEQEIELLIENKTTKLFVDNFLQETEKER------Q 237
            ..:........:.|:.: |.:..|...:|.||.|:.||.:..:    :||||:..:|:      .
plant   136 SFQGLRARMNNEYKETVERRYFTITGEKADEQTIDNLIASGES----ENFLQKAIQEQGRGQILD 196

  Fly   238 TLREMMDRFNELRRLEKSIEEVHALFMRIQTLVMEQSEVIQRVEFHAQQATLHVDKGADELDQAE 302
            |:.|:.:|.:.::.:||::.|:|.:|:.:..||..|.:.:..:|.|..:|:..|.:|.|:|..|.
plant   197 TISEIQERHDAVKEIEKNLLELHQVFLDMAALVEAQGQQLNNIESHVAKASSFVRRGTDQLQDAR 261

  Fly   303 QHQKKARK---KKIMLIVILAAVLLVLLLVGIYL 333
            ::||.:||   ..|:|.:::..:||:.||..|.|
plant   262 EYQKSSRKWTCYAIILFIVIFILLLIPLLPHIML 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx4NP_525057.2 Syntaxin 93..273 CDD:279182 50/225 (22%)
SNARE_syntaxin1-like 238..298 CDD:277201 17/59 (29%)
SYP125NP_172591.1 Syntaxin 28..233 CDD:395647 43/209 (21%)
SNARE 201..267 CDD:419871 19/65 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5074
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53912
OrthoDB 1 1.010 - - D1033833at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19957
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.890

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