Protein Alignment Syx4 and VAM3

DIOPT Version :10

• Sequence 1: NP_525057.2
• Gene: Syx4 / 31269
• FlyBaseID: FBgn0024980
• Length: 333
• Species: Drosophila melanogaster
• Sequence 2: NP_568671.1
• Gene: VAM3 / 834730
• AraportID: AT5G46860
• Length: 268
• Species: Arabidopsis thaliana
• Alignment Length: 255
• Identity: 56/255 - (21%)
• Similarity: 102/255 - (40%)
• Gaps: 48/255 - (18%)

  Fly   100 QIAANLETMNRMAQTVNLRTFNENEMDELHNKNLRLGNQLMTRFNDFKANL--PAENDYS----- 157
            ||...:.|..|:..|:..........::||...|.:| ||:   .|..|.|  .:|.|:.
plant    34 QINTGVSTFQRLVNTLGTPKDTPELREKLHKTRLHIG-QLV---KDTSAKLKEASETDHQSGVNP 94

  Fly   158 ----LEARMKRTLFYGLHQTFINLWHKNELFLQNYETKVKKNLRLHTKIINSEA-----SEQEIE 213
                .:|::.|..     |..:..:.|.:......||       .:|..:...|     :..|::
plant    95 SKKIADAKLARDF-----QAVLKEFQKAQQTAAERET-------TYTPFVPQSALPSSYTAGEVD 147

  Fly   214 LLIENKTTKLFVDNFLQETEKERQTLREMMDRFNE--LRRLEKSIEEVH-------ALFMRIQTL 269
            .:.|.:..       |||::::...|.:....|||  :...|:.|:|:|       .:|..:..|
plant   148 KVPEQRAQ-------LQESKRQELVLLDNEIAFNEAVIEEREQGIQEIHQQIGEVNEIFKDLAVL 205

  Fly   270 VMEQSEVIQRVEFHAQQATLHVDKGADELDQAEQHQKKARKKKIMLIVILAAVLLVLLLV 329
            |.:|..:|..:..|...:.....:|..:|.||.:.||.......:|:||...|||::::|
plant   206 VNDQGVMIDDIGTHIDNSRAATSQGKSQLVQAAKTQKSNSSLTCLLLVIFGIVLLIVIIV 265

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Syx4	NP_525057.2	COG5074	<187..313	CDD:227406	29/139 (21%)
		SNARE_syntaxin1-like	238..298	CDD:277201	15/68 (22%)
VAM3	NP_568671.1	Syntaxin_2	28..128	CDD:464199	22/109 (20%)
		SNARE_Qa	178..236	CDD:277193	12/57 (21%)