DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx4 and SYP122

DIOPT Version :9

Sequence 1:NP_525057.2 Gene:Syx4 / 31269 FlyBaseID:FBgn0024980 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_190808.1 Gene:SYP122 / 824405 AraportID:AT3G52400 Length:341 Species:Arabidopsis thaliana


Alignment Length:301 Identity:71/301 - (23%)
Similarity:138/301 - (45%) Gaps:32/301 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 SVVSQNSHSCSNNNSSTEPKDRSSSKMTQYGSNVD------DILNPYTEIRQQLAQIAANLETMN 109
            ||...:|...|:|...::.|....|  ...|:|:|      :::|   |..::|.::..||.:.|
plant    12 SVADGSSPPHSHNIEMSKAKVSGGS--CHGGNNLDTFFLDVEVVN---EDLKELDRLCHNLRSSN 71

  Fly   110 RMAQTVNLRTFNENEMDELHNK-------------NLRLGNQLMTRFNDFKANLPAENDYSLEAR 161
            ..::|::    |.|.:.||..|             .|:...:.:.|.|:...:||.....|...|
plant    72 EQSKTLH----NANAVKELKKKMDADVTAALKTARRLKGNLEALDRANEVNRSLPESGPGSSSDR 132

  Fly   162 MKRTLFYGLHQTFINLWHKNELFLQNYETKVKKNL-RLHTKIINSEASEQEIELLIENKTTKLFV 225
            .:.::..||.:...:...|.....:....:.|:.: |:...:......|..:|.||....::.|:
plant   133 QRTSVVNGLRKKLKDEMEKFSRVRETITNEYKETVGRMCFTVTGEYPDEATLERLISTGESETFL 197

  Fly   226 DNFLQETEKER--QTLREMMDRFNELRRLEKSIEEVHALFMRIQTLVMEQSEVIQRVEFHAQQAT 288
            ...:||..:.|  .|:.|:.:|.:.::.:|||:.|:|.:|:.:..||..|...:..:|.:.::|.
plant   198 QKAIQEQGRGRILDTINEIQERHDAVKDIEKSLNELHQVFLDMAVLVEHQGAQLDDIEGNVKRAN 262

  Fly   289 LHVDKGADELDQAEQHQKKARKKKIMLIVILAAVLLVLLLV 329
            ..|..|||.|.:|..:||..||.....|::| .:::||::|
plant   263 SLVRSGADRLVKARFYQKNTRKWTCFAILLL-LIIVVLIVV 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx4NP_525057.2 Syntaxin 93..273 CDD:279182 42/195 (22%)
SNARE_syntaxin1-like 238..298 CDD:277201 18/59 (31%)
SYP122NP_190808.1 Syntaxin 43..248 CDD:366315 44/211 (21%)
SNARE 216..282 CDD:389950 20/65 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5074
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53912
OrthoDB 1 1.010 - - D1033833at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19957
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.890

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