DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syx4 and Stx19

DIOPT Version :9

Sequence 1:NP_525057.2 Gene:Syx4 / 31269 FlyBaseID:FBgn0024980 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_080864.1 Gene:Stx19 / 68159 MGIID:1915409 Length:292 Species:Mus musculus


Alignment Length:316 Identity:61/316 - (19%)
Similarity:127/316 - (40%) Gaps:53/316 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KDRLPELLQRSLSTNSSNSSSNGSLLLNVYSGTTEFIIGNTGGNNNSYSVVSQNSHSCSNNNSST 67
            ||||.||.|:   |.....|.:|.:.:....|...           ..:|:.:.           
Mouse     2 KDRLQELKQK---TKEIELSRDGQVFVEEEQGVLV-----------QQAVIYER----------- 41

  Fly    68 EP-KDRSSSKMTQYGSNVDDILNPYTEIRQQLAQIAANLETMNRMAQTVNLRTFNENEMDELHNK 131
            || .:|...::.:...|::..::......||...:.|            ::|.|:..:.|....|
Mouse    42 EPVAERHLHEIQKLQENINSFVDDVQRFGQQQKSLVA------------SMRRFSLLKRDSTIAK 94

  Fly   132 NLRLGNQLMTR-----FNDFKANLPAENDYSLEARMKRTLFYGLHQTFINLWHKNELFLQN---- 187
            .:::..:.:.|     ..:.|.:.......|:..|:.::.:..:.:.|     :..:||.|    
Mouse    95 EIKIQAEHINRALGDVVKEVKKSEVENGPSSVVTRILKSQYAAMFRRF-----QQTMFLYNDTIA 154

  Fly   188 -YETKVKKNLRLHTKIINSEASEQEIELLIENKTTKLFVDNFLQETEKERQTLREMMDRFNELRR 251
             .:.|.|..:....::...|.||:|:..::.:...::|.::.|.||...:..|.|:..|..||..
Mouse   155 LKQEKCKTFIVRQLEVAGKEVSEEEVNDMLHHGKWEVFNESLLTETSITKAQLSEIEQRHKELVN 219

  Fly   252 LEKSIEEVHALFMRIQTLVMEQSEVIQRVEFHAQQATLHVDKGADELDQAEQHQKK 307
            ||..::::..||::|..||.||.|.|..:|........:|:...::...|.:::|:
Mouse   220 LENQVKDLRDLFIQISLLVEEQGESINSIEVMVNSTKDYVNNTKEKFGLAVKYKKR 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx4NP_525057.2 Syntaxin 93..273 CDD:279182 37/189 (20%)
SNARE_syntaxin1-like 238..298 CDD:277201 18/59 (31%)
Stx19NP_080864.1 SynN 45..194 CDD:238105 24/165 (15%)
Syntaxin 46..242 CDD:279182 40/212 (19%)
SNARE 206..268 CDD:304603 18/61 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836261
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5074
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1033833at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.810

Return to query results.
Submit another query.