DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syx4 and Stx19

DIOPT Version :10

Sequence 1:NP_525057.2 Gene:Syx4 / 31269 FlyBaseID:FBgn0024980 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_080864.1 Gene:Stx19 / 68159 MGIID:1915409 Length:292 Species:Mus musculus


Alignment Length:316 Identity:61/316 - (19%)
Similarity:127/316 - (40%) Gaps:53/316 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KDRLPELLQRSLSTNSSNSSSNGSLLLNVYSGTTEFIIGNTGGNNNSYSVVSQNSHSCSNNNSST 67
            ||||.||.|:   |.....|.:|.:.:....|...           ..:|:.:.           
Mouse     2 KDRLQELKQK---TKEIELSRDGQVFVEEEQGVLV-----------QQAVIYER----------- 41

  Fly    68 EP-KDRSSSKMTQYGSNVDDILNPYTEIRQQLAQIAANLETMNRMAQTVNLRTFNENEMDELHNK 131
            || .:|...::.:...|::..::......||...:.|            ::|.|:..:.|....|
Mouse    42 EPVAERHLHEIQKLQENINSFVDDVQRFGQQQKSLVA------------SMRRFSLLKRDSTIAK 94

  Fly   132 NLRLGNQLMTR-----FNDFKANLPAENDYSLEARMKRTLFYGLHQTFINLWHKNELFLQN---- 187
            .:::..:.:.|     ..:.|.:.......|:..|:.::.:..:.:.|     :..:||.|    
Mouse    95 EIKIQAEHINRALGDVVKEVKKSEVENGPSSVVTRILKSQYAAMFRRF-----QQTMFLYNDTIA 154

  Fly   188 -YETKVKKNLRLHTKIINSEASEQEIELLIENKTTKLFVDNFLQETEKERQTLREMMDRFNELRR 251
             .:.|.|..:....::...|.||:|:..::.:...::|.::.|.||...:..|.|:..|..||..
Mouse   155 LKQEKCKTFIVRQLEVAGKEVSEEEVNDMLHHGKWEVFNESLLTETSITKAQLSEIEQRHKELVN 219

  Fly   252 LEKSIEEVHALFMRIQTLVMEQSEVIQRVEFHAQQATLHVDKGADELDQAEQHQKK 307
            ||..::::..||::|..||.||.|.|..:|........:|:...::...|.:::|:
Mouse   220 LENQVKDLRDLFIQISLLVEEQGESINSIEVMVNSTKDYVNNTKEKFGLAVKYKKR 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx4NP_525057.2 COG5074 <187..313 CDD:227406 31/126 (25%)
SNARE_syntaxin1-like 238..298 CDD:277201 18/59 (31%)
Stx19NP_080864.1 Syntaxin 47..242 CDD:459942 40/211 (19%)
SNARE 210..276 CDD:473982 18/66 (27%)

Return to query results.
Submit another query.