DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx4 and Syx13

DIOPT Version :9

Sequence 1:NP_525057.2 Gene:Syx4 / 31269 FlyBaseID:FBgn0024980 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_001261794.1 Gene:Syx13 / 39485 FlyBaseID:FBgn0036341 Length:284 Species:Drosophila melanogaster


Alignment Length:302 Identity:61/302 - (20%)
Similarity:137/302 - (45%) Gaps:47/302 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GNTGGNNNSYSVVSQN----SHSCSNNNSSTEPKDRSSSKMTQYGSNVDDILNPYTEIRQQLAQI 101
            |..||.:..|..::.:    |.:.:..:|...|        |::.|..:||.:..|.|.....|:
  Fly    12 GGGGGPHRDYGAMADSTPEVSFAAAGGSSGFSP--------TEFMSLSEDIGHNITAIHSSTKQL 68

  Fly   102 AANLETMNRMAQTVNLRTFNENEMDELHNKNLRLGNQLMTRFNDFKANLPAENDYSLEARMKRTL 166
            ...|:.:....:..|||       :::|..|.:...::.|...|.:             |::..:
  Fly    69 EKQLKLIGTSKEQPNLR-------EKVHTINTKCNARVQTTSQDLQ-------------RLQAVV 113

  Fly   167 FYGLHQTFINLWHKNELFLQNYETKVKKNLRLHTKIINS-----EASEQEIELLIE-NKTTKLFV 225
            .:|..|..:.|    |...:.:...|:|...|..:|.::     :.::|..:.::| |...:|..
  Fly   114 RHGDRQQKLQL----EKLTREFHGVVEKYSNLQRRISSAMRQTLQQAQQFADQVVETNARAELLQ 174

  Fly   226 DNFLQETEKERQTLREMM-DRFNELRRLEKSIEEVHALFMRIQTLVMEQSEVIQRVEFHAQQATL 289
            ...|::...:::  .:|: ||..::.::|..|.:|:.:..::..||.:|.:.:..:|...:|...
  Fly   175 QQRLEQAHLQQE--HDMLDDRRRQVEQIESDIIDVNQIMTQLSGLVHDQGQQMDFIENSIEQTAA 237

  Fly   290 HVDKGADELDQAEQHQKKARKKKIMLIVILAAVLLVLLLVGI 331
            :|:.|..||.:|.:.::..|:|.::|:||  ||::.|::.|:
  Fly   238 NVEDGTSELAKAARSRQSYRRKILILLVI--AVIIGLIVTGV 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx4NP_525057.2 Syntaxin 93..273 CDD:279182 32/186 (17%)
SNARE_syntaxin1-like 238..298 CDD:277201 13/60 (22%)
Syx13NP_001261794.1 Syntaxin_2 54..153 CDD:291208 21/122 (17%)
SNARE_syntaxin7_like 190..249 CDD:277200 14/58 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467321
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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