DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx4 and Syx16

DIOPT Version :9

Sequence 1:NP_525057.2 Gene:Syx4 / 31269 FlyBaseID:FBgn0024980 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_523420.1 Gene:Syx16 / 33034 FlyBaseID:FBgn0031106 Length:352 Species:Drosophila melanogaster


Alignment Length:382 Identity:75/382 - (19%)
Similarity:136/382 - (35%) Gaps:129/382 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 TTEFII--GNTGGNNNSYSVVSQNSHSCSNNNSSTEPKDRSSSKMTQYGSNVDD-------ILNP 90
            |..|:|  .|...|.|.|.         ....|..|...:.|.:..:.|..:.|       .|:.
  Fly     7 TEVFVIMRNNASKNRNHYD---------DRRGSDAERLLKHSVREAEEGLELQDDYGTPPAWLDK 62

  Fly    91 YTEIRQQLAQIAANLETMNRMAQTVNLRTFNENEMDELHNKNLRLGNQLMTRFNDFKANLPAEND 155
            :.|.:..:::|...|:                 |:..||.::|     |...|:|.:.:   |.|
  Fly    63 FEEAQYTMSKIKPKLD-----------------ELGSLHARHL-----LRPAFDDQRDD---ECD 102

  Fly   156 YSLEARMKRTLFYGLHQTF------------------INLWHKNELFLQNYETKVKKN-----LR 197
            ..:.:::...|....|:..                  :|..|...|.||....|.:.:     |:
  Fly   103 IEVLSQIVSKLITSTHRHIQCVRSSIGVGSKMEQCLTVNAVHCALLQLQELTVKFRASQNAYLLQ 167

  Fly   198 LHTK-------------------IINSEASEQEIELLIENKTTKLFVDNFLQETEK--------- 234
            |:::                   ..|.|..||..|..:::      .|||||...:         
  Fly   168 LNSREERSQKYFDDGGGAGAGDVFTNVELGEQSAENFVDS------FDNFLQPPAEGKSGNGYLF 226

  Fly   235 ---------------------------ERQTLREMMDRFNELRRLEKSIEEVHALFMRIQTLVME 272
                                       |.:..|....|..|:.::.|||.:::.:|..:..:|.|
  Fly   227 EDDEQAIDDHFQRPPASRMTQQQLLLFEEENTRVAQHREQEVTKIVKSIYDLNDIFKDLGHMVQE 291

  Fly   273 QSEVIQRVEFHAQQATLHVDKGADELDQAEQHQKKARKKKIMLIVILAAVLLVLLLV 329
            |..|:.|::::.:|....|.:|..:|.:||.:|:|.|  |:.:|::||||...:||:
  Fly   292 QGTVLDRIDYNVEQTQTRVSEGLRQLHKAEMYQRKNR--KMCVILVLAAVTFFMLLL 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx4NP_525057.2 Syntaxin 93..273 CDD:279182 41/257 (16%)
SNARE_syntaxin1-like 238..298 CDD:277201 15/59 (25%)
Syx16NP_523420.1 SNARE_syntaxin16 261..319 CDD:277198 15/57 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447431
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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