DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx4 and psy1

DIOPT Version :9

Sequence 1:NP_525057.2 Gene:Syx4 / 31269 FlyBaseID:FBgn0024980 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_588053.1 Gene:psy1 / 2539377 PomBaseID:SPCC825.03c Length:284 Species:Schizosaccharomyces pombe


Alignment Length:274 Identity:62/274 - (22%)
Similarity:125/274 - (45%) Gaps:36/274 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 MTQYGSNVDDILNPYTEIRQQLAQI-------AANLETMNRMAQTVNLRTFNENEMDELHNKNLR 134
            |.::...:|.|.:...:|...:.:|       ...::..|..|.|.:|..:..:      .:.|:
pombe    18 MGEFFEEIDHIRDAIRQIEDNVGRIEMLHQQSLQEIDEANIAATTRHLEGYTSD------TRRLQ 76

  Fly   135 LGNQLMTR-FNDFKANLPAENDYSLEARMKRTLFYGLHQTFIN-LWHKNELFLQ---NYETKVKK 194
            ...||..| .......||.:||    ...::|....:.:.|:: :.|    |||   .|..:.::
pombe    77 TSVQLAIRSLESQNMQLPPDND----TATRKTQTEAVKKKFMDQIRH----FLQIEKTYRAQYEQ 133

  Fly   195 NLRLHTKIINSEASEQEIELLI-ENKTTKLFVDNFLQETE--KERQTLREMMDRFNELRRLEKSI 256
            .:|...:|.|..|:|.:.:..| |....::|....|:...  :.|..|||:.:|..:::|:|::|
pombe   134 RMRRQLEIANPRATEDDFQTAINEENGGQVFAQALLRSNRSGEARTALREVQERHADIKRIERTI 198

  Fly   257 EEVHALFMRIQTLVMEQSEVIQRVEFHAQQATLHVDKGADELDQAEQHQKKARKKK-------IM 314
            .|:..||..:.|:|.||..::.::...|.....::.:|...:|:|.:..:.|||||       ::
pombe   199 AELAQLFQDMATMVQEQEPMVDKIVTDAVNVRTNMGEGTQHMDRAIKSARAARKKKWICFGICVV 263

  Fly   315 LIVILAAVLLVLLL 328
            :|.::.|||..:|:
pombe   264 IICVIVAVLCGVLI 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx4NP_525057.2 Syntaxin 93..273 CDD:279182 43/194 (22%)
SNARE_syntaxin1-like 238..298 CDD:277201 16/59 (27%)
psy1NP_588053.1 COG5074 1..284 CDD:227406 62/274 (23%)
SynN 18..167 CDD:238105 32/162 (20%)
SNARE_Sso1 181..244 CDD:277202 17/62 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5074
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53912
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

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