DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crm and Cramp1

DIOPT Version :9

Sequence 1:NP_477105.2 Gene:crm / 31268 FlyBaseID:FBgn0000376 Length:982 Species:Drosophila melanogaster
Sequence 2:XP_006524762.1 Gene:Cramp1 / 57354 MGIID:1930190 Length:1335 Species:Mus musculus


Alignment Length:1321 Identity:306/1321 - (23%)
Similarity:481/1321 - (36%) Gaps:465/1321 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PPPPLTQPPPPSSSVSIEEPL-----------------------------PNGKG--GGAVVVNS 42
            ||..|..|.||..|...:...                             |.|||  |||....:
Mouse   109 PPRGLPTPSPPQGSPQDQHHFLRSSVRPQSKRPRKDAPCALGSGGASGSGPRGKGSDGGASSSGN 173

  Fly    43 IAKLPEEELLGSVTMHNCPGTRASARVIQKMKQDQTRPMTPPPSEREPNKKEEKAAQKTPSQLKT 107
            ::        |:.......|:|:|:|.|               ....|.|:|.|..::.      
Mouse   174 VS--------GATPATPAGGSRSSSRNI---------------GSSGPEKEEGKKVRRQ------ 209

  Fly   108 GSGKTTWTNVERNCFFDALNEFGKDFEAVANCINAKLKRRNANSDYSFKTKDQVRQHYYQTHHKI 172
               ..:|:..::|.||:.|.|.||||||:.|.|..|.|::...:. ..|.|:|||..||:|.|||
Mouse   210 ---WESWSTEDKNTFFEGLYEHGKDFEAIQNNIALKYKKKGKPAS-MVKNKEQVRHFYYRTWHKI 270

  Fly   173 CKYVR----FSEELKKPAQELYTLINYGEMRRKL-QFLTEKHFMKLKQLVYQGQITVRCKGKNIR 232
            .||:.    ||..|||.:||||.||.|||:|:|: ..:.:|:..||.:|:..|..|||.||:|:|
Mouse   271 TKYIDFDNVFSRGLKKSSQELYGLICYGELRKKIGGCMDDKNATKLNELIQVGATTVRYKGRNLR 335

  Fly   233 IKTPSCKALRRLNQLDDSLED------IRLPSKVEVLVTPANMEAFGRVQSLAQNPRGRIIVPLH 291
            ||.|.|:||::|.. .|.|.|      :|||.||.|.:.|.|..|:.||||||||||.|:||.||
Mouse   336 IKAPMCRALKKLCD-PDGLSDEEDQKPVRLPLKVPVELQPRNNHAWARVQSLAQNPRLRMIVELH 399

  Fly   292 KKLISFIKTFEYKWRSANQRLHEEKSAYFSSSLPSAASNNNNNNNETEPLQPSVA-SLDP--SMC 353
            :|:.|.|:..:.||     .|||.:       :...........:.|...|..|| .|.|  :..
Mouse   400 RKVSSLIEFLKQKW-----ALHEVR-------IRKTLEERQLQGSSTVQTQEKVALHLFPGENCT 452

  Fly   354 FQPRPGVA--IHRPLLSITAYLSSISICLTAYEE----RMGFK-VRS----ETLGNLAGMSVAAN 407
            ..|.||||  :|           |.:.|...::|    :.|.| :.|    :.||..:|..:|..
Mouse   453 LTPLPGVARVVH-----------SKAFCTVHWQEGGRCKQGTKDIHSLPPAQILGIQSGQGIARG 506

  Fly   408 KRLRTESGSEKRSPETKKPKSSASPPL-EKSLDDGPLEGNLMKMENSSGDELGEEIHEFLGDILE 471
            :.....|.:|.:......|.:.||... |.|.:..|.||....:.:....:              
Mouse   507 QLKCQRSSAEGKGGGRLLPTADASQSSGESSPESAPAEGAAPSLSSPDAPD-------------- 557

  Fly   472 AMQHPQAATIPALSATTGDTTTVAVALETSHDPVQQ--AYPANA----DLSNAMA---------- 520
             ..|....:.|.|..|  ..|.:||..::   |:|:  |.|...    ||.:.::          
Mouse   558 -RPHGLQDSGPHLEKT--PVTALAVGRDS---PIQESGALPCPCGQPPDLEDELSLLDPFPRYLK 616

  Fly   521 ---TSVLQTSC----------------AAAPAPSTPVTGSLA--AP------------------- 545
               ..::...|                .|:|...||.:|::|  ||                   
Mouse   617 SCQDLIIPEQCRRADTRSGREHPPLGSVASPETLTPSSGAVADSAPPGLDPQPGTDHQPDTRLQS 681

  Fly   546 -----SVARSKRKEAKEAAAAAQ---------ARNFKPLLSDDILKRIR-KGWTQANAADITIGD 595
                 .:|.:..:|::|..:.::         .|..|.:.:..:.:::| :||:...:..:|:.:
Mouse   682 DICTKELANASSEESQEKGSPSEHLSSQGQPATRPSKEVPASQLAQQLREEGWSLQTSESLTLAE 746

  Fly   596 LYVVFGQDSKLELEYYWCEV----------DSSTAMASS--------------ILTINT-VTPSS 635
            :|::.|:.:||:|||.|..|          ...||::.|              :..|:| |.|..
Mouse   747 VYLMMGKPTKLQLEYDWLAVLGPESQAPTAQGQTALSRSSPSALHQQRLLSCLLRLISTEVHPKM 811

  Fly   636 SSVATQTGSAASNANQ--------------TGASSNCYVSAS---SNSSTSSTSLPYNP------ 677
            :..|....:|:....|              ...|..|..:.|   ||.:..|.|.|.:|      
Mouse   812 AFEANTASTASVRPTQEEQSTTPPGKVVTINSRSPRCSRNPSTLRSNKTFPSASAPCSPGLRNPP 876

  Fly   678 -----------NDCDSVERVRAVTTSSVSN----KL------------KHLLLVANLSE------ 709
                       ...||...:.||.|:...|    ||            :||..::..|:      
Mouse   877 RPLLVAGPSSTGSSDSDGGLFAVPTTLPPNSRHGKLFSPSKEAELTFRQHLDSISIQSDFFSPKP 941

  Fly   710 -RVRKRQCNCGHTCDRK-----RDLMTKAQQ-----------LAEATATGGVGGMVEGNFRTPML 757
             ::|||..       ||     |.|:.:..:           |:.:...|      .|.||    
Mouse   942 KKLRKRHL-------RKPLVVQRTLLPRPSENQSHNVCSFSILSNSPIAG------RGWFR---- 989

  Fly   758 PVRRPISNIDPVRQLSALTRQKISRQVLVQRRLLPPTSAGDRPYDLLSVRQLHSGLF--EPIDRV 820
                      |::  |:||:..:||.::  .::||..:....| ..:.:....:|:.  .|:..:
Mouse   990 ----------PIQ--SSLTKAALSRPIV--PKVLPSQATSHLP-SAIDLAAQSAGIIPGSPLPIL 1039

  Fly   821 DGISSAGISTSGSKPDSSMNATTASQDQEPGDQG---------ALEFLNDEATQVSARDM----- 871
            |...|:|||     |.||..||||...|  ||.|         |:...||....|:..:.     
Mouse  1040 DTDGSSGIS-----PLSSEQATTAISGQ--GDTGPHQNRDPVTAVRGTNDPFISVTRPEQEPMTD 1097

  Fly   872 --------------------------------------PN----LDICV-------------ATN 881
                                                  ||    |||.:             ||.
Mouse  1098 GFQGSPALTLPELSKANLQNGLSIPLPSSESSSTRLSPPNVSALLDISLPGPPEDVLSQGEPATQ 1162

  Fly   882 RTD------VSSS-------LNEAAQDGS-TTQSFFQGSMSPM-HLLRDSTSNARWLEDNINDFS 931
            .:|      :||.       |:.|..:|| :::|....|.||. :.:...|.:.:|...:..|.|
Mouse  1163 ISDSIIEIAISSGQYSEGVPLSPAKLNGSDSSKSLPSPSSSPQPNWIASPTHDPQWYPSDSADSS 1227

  Fly   932 LTSLLGHLDEIDATR------------------DILDPSSSMSVIS------------------- 959
            |:||.......:.:|                  .:||.:|..|.:|                   
Mouse  1228 LSSLFASFISPEKSRKMLPTTVGANSGTSLLGPSLLDGNSRDSFVSRSLADVAEVVDSQLVCMMN 1292

  Fly   960 ESSVDFRHKFQEIAALLQQQE 980
            |:|:|:..:|.::|..|...|
Mouse  1293 ENSIDYISRFNDLAQELSITE 1313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crmNP_477105.2 SANT 111..171 CDD:197842 24/59 (41%)
SANT 113..167 CDD:238096 22/53 (42%)
Cramp1XP_006524762.1 DUF601 175..>255 CDD:282493 26/112 (23%)
PHA03309 <491..669 CDD:165564 36/197 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850202
Domainoid 1 1.000 185 1.000 Domainoid score I3364
eggNOG 1 0.900 - - E1_KOG4468
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 186 1.000 Inparanoid score I3918
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004844
OrthoInspector 1 1.000 - - oto93753
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21677
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3886
SonicParanoid 1 1.000 - - X5188
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.970

Return to query results.
Submit another query.