DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2712 and Zfp398

DIOPT Version :10

Sequence 1:NP_570028.1 Gene:CG2712 / 31267 FlyBaseID:FBgn0024975 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001102700.1 Gene:Zfp398 / 500108 RGDID:1562129 Length:643 Species:Rattus norvegicus


Alignment Length:378 Identity:112/378 - (29%)
Similarity:146/378 - (38%) Gaps:66/378 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 DDQ---EVTEYPAET--------------IRDEEQLLV-VESDEAESRLEAPIVQEERLDIALEQ 171
            |||   |.:|.||:.              |:.||:..| |..:..||.|......:|.|.|..| 
  Rat   204 DDQPRPEASEMPADPSEEPGLSTSDILSWIKQEEEPQVGVPQESKESELYKGTYADEELVIKAE- 267

  Fly   172 HEDDLCEIVDDPDPEQRRSRLERSEPALQCPICGKQLARKRTFQYHMRLHGQPKIRQEDNDHCIE 236
               ||.          |.|.......|...|   ...|.|.||              .|.....:
  Rat   268 ---DLA----------RASLCPEVPVAFSAP---PPAAAKDTF--------------SDIAFKSQ 302

  Fly   237 ECLQVEPVLQAKAGEDVYEIVEKS-AQTSATQKTLPSGSRPWKPL--NPSLQCKICGKQLSTNNS 298
            :|..:.|.     |....::.|.| .|.:.||    .||.|..|.  .....|..|||.|| .:.
  Rat   303 QCTPMAPF-----GRTATDLPEASEGQVTFTQ----LGSYPLPPPVGEQVFSCHHCGKNLS-QDM 357

  Fly   299 FKYHMQLHGTATPYVCTICGESFKTRNARDGHVTL-HDRNNPNRCPTCFKVYRQASSLRTHLLIH 362
            ...|...|....|..|..|.:.| |..|..|..:. |....|..||.|.:.:...|.|..||.:|
  Rat   358 LMTHQCSHAAEHPLTCAQCPKHF-TPQADLGSTSQDHANETPPTCPHCARTFTHPSRLTYHLRVH 421

  Fly   363 SGI-KPFECSICGKRLTQKSGYKKHMLTHTGEKPHGCDICGRRFRYSSNLIAHKRCHSQEKPHPC 426
            :.. :||.|..|.||...::....|...|..|:|..|..|||.|....:|:.|:|.|:||:|..|
  Rat   422 NSTERPFLCPDCPKRFADQARLTSHRRAHATERPFRCPQCGRSFSLKISLLLHQRGHAQERPFSC 486

  Fly   427 PVCQKRSFGSTSELNRHMLVHSSERPFGCEQCGKSFKRRISLAIHRQSHKAGR 479
            |.| ...|...|.|.||.::|:.|||:.|..|.|||.|:..|..||:.|...|
  Rat   487 PQC-GIDFNGHSALIRHQMIHTGERPYPCTDCSKSFMRKEHLLNHRRLHTGER 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2712NP_570028.1 zf-AD 13..93 CDD:462262
SFP1 <273..358 CDD:227516 26/87 (30%)
C2H2 Zn finger 286..306 CDD:275368 7/19 (37%)
C2H2 Zn finger 314..334 CDD:275368 6/20 (30%)
C2H2 Zn finger 342..362 CDD:275368 7/19 (37%)
C2H2 Zn finger 370..390 CDD:275368 5/19 (26%)
COG5048 378..>463 CDD:227381 32/84 (38%)
C2H2 Zn finger 398..418 CDD:275368 8/19 (42%)
C2H2 Zn finger 426..447 CDD:275368 8/20 (40%)
C2H2 Zn finger 455..475 CDD:275368 9/19 (47%)
Zfp398NP_001102700.1 KRAB 143..203 CDD:214630
COG5048 <344..588 CDD:227381 70/198 (35%)
C2H2 Zn finger 346..365 CDD:275368 7/19 (37%)
C2H2 Zn finger 373..393 CDD:275368 6/20 (30%)
C2H2 Zn finger 401..421 CDD:275368 7/19 (37%)
C2H2 Zn finger 430..450 CDD:275368 5/19 (26%)
C2H2 Zn finger 458..478 CDD:275368 8/19 (42%)
C2H2 Zn finger 486..506 CDD:275368 8/20 (40%)
C2H2 Zn finger 514..534 CDD:275368 9/19 (47%)
C2H2 Zn finger 542..562 CDD:275368
C2H2 Zn finger 570..589 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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