DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2712 and gl

DIOPT Version :10

Sequence 1:NP_570028.1 Gene:CG2712 / 31267 FlyBaseID:FBgn0024975 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster


Alignment Length:143 Identity:59/143 - (41%)
Similarity:81/143 - (56%) Gaps:1/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 GTATPYVCTICGESFKTRNARDGHVTLHDRNNPNRCPTCFKVYRQASSLRTHLLIHSGIKPFECS 371
            |...|.:|.:||:::...:....|:..|....|.|||.|.|.:.||::|..|:..|:|.|||.|.
  Fly   432 GEMKPNLCRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCP 496

  Fly   372 ICGKRLTQKSGYKKHMLTHTGEKPHGCDICGRRFRYSSNLIAHKRCHSQEKPHPCPVCQKRSFGS 436
            ||.:|.:|.|....||.||:||:|:.|..|.:.|..||.|..|.|.||.|||:.|.:|..| |..
  Fly   497 ICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLR-FSQ 560

  Fly   437 TSELNRHMLVHSS 449
            :..|||||.||.:
  Fly   561 SGNLNRHMRVHGN 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2712NP_570028.1 zf-AD 13..93 CDD:462262
SFP1 <273..358 CDD:227516 16/50 (32%)
C2H2 Zn finger 286..306 CDD:275368
C2H2 Zn finger 314..334 CDD:275368 4/19 (21%)
C2H2 Zn finger 342..362 CDD:275368 8/19 (42%)
C2H2 Zn finger 370..390 CDD:275368 8/19 (42%)
COG5048 378..>463 CDD:227381 33/72 (46%)
C2H2 Zn finger 398..418 CDD:275368 8/19 (42%)
C2H2 Zn finger 426..447 CDD:275368 9/20 (45%)
C2H2 Zn finger 455..475 CDD:275368
glNP_001262708.1 COG5048 <426..571 CDD:227381 57/139 (41%)
C2H2 Zn finger 439..459 CDD:275368 4/19 (21%)
C2H2 Zn finger 467..487 CDD:275368 8/19 (42%)
C2H2 Zn finger 495..515 CDD:275368 8/19 (42%)
C2H2 Zn finger 523..543 CDD:275368 8/19 (42%)
C2H2 Zn finger 551..571 CDD:275368 9/20 (45%)
Blue background indicates that the domain is not in the aligned region.

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