DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2712 and Zfp78

DIOPT Version :9

Sequence 1:NP_570028.1 Gene:CG2712 / 31267 FlyBaseID:FBgn0024975 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001020334.1 Gene:Zfp78 / 330463 MGIID:107783 Length:512 Species:Mus musculus


Alignment Length:299 Identity:101/299 - (33%)
Similarity:149/299 - (49%) Gaps:30/299 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 RLERSEPALQCPICGKQLARKRTFQYHMRLHGQPKIRQEDNDHCIEEC---------LQVEPVLQ 246
            |:...|...||.:|||...:......|...|...|:.|     | |||         |.|.  .:
Mouse   225 RIHTGEKPYQCTVCGKAFKQSHHLAQHHTTHTHEKLFQ-----C-EECKKAFSQNSYLTVH--RR 281

  Fly   247 AKAGEDVYEIVE--KSAQTS---ATQKTLPSGSRPWKPLNPSLQCKICGKQLSTNNSFKYHMQLH 306
            ...||..|:..|  ||.:..   |....:.:|.:|:|       |:||||..:.:.|...|.::|
Mouse   282 IHTGEKPYKCKECAKSFRQPAHLAQHHRIHTGEKPYK-------CEICGKAFNHSMSLTGHQRVH 339

  Fly   307 GTATPYVCTICGESFKTRNARDGHVTLHDRNNPNRCPTCFKVYRQASSLRTHLLIHSGIKPFECS 371
            ....||.|..||::|:.......|..:|....|..|..|.|.:|::|.|..|...|:|.|||||.
Mouse   340 SGEKPYKCKDCGKAFRQSIHLVVHSRIHTGEEPYECNECGKTFRESSQLTIHQRNHTGEKPFECK 404

  Fly   372 ICGKRLTQKSGYKKHMLTHTGEKPHGCDICGRRFRYSSNLIAHKRCHSQEKPHPCPVCQKRSFGS 436
            .|||...:.:...:|...||||||:.|:.||:.|.:::.||.|||.|:.|||:.|..|.| :||.
Mouse   405 QCGKFFNRSAYLARHQKIHTGEKPYECNECGKTFTHAAYLIRHKRVHTGEKPYKCAECGK-AFGD 468

  Fly   437 TSELNRHMLVHSSERPFGCEQCGKSFKRRISLAIHRQSH 475
            .|...:|..:|:.:||:.||:||::|:|:.||..|::.|
Mouse   469 GSSRAQHQRLHTGQRPYVCEKCGRAFRRKSSLNCHQRYH 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2712NP_570028.1 zf-AD 13..92 CDD:214871
C2H2 Zn finger 286..306 CDD:275368 7/19 (37%)
C2H2 Zn finger 314..334 CDD:275368 5/19 (26%)
C2H2 Zn finger 342..362 CDD:275368 7/19 (37%)
zf-H2C2_2 354..379 CDD:290200 12/24 (50%)
C2H2 Zn finger 370..390 CDD:275368 5/19 (26%)
COG5048 378..>463 CDD:227381 34/84 (40%)
zf-H2C2_2 384..407 CDD:290200 11/22 (50%)
C2H2 Zn finger 398..418 CDD:275368 9/19 (47%)
C2H2 Zn finger 426..447 CDD:275368 7/20 (35%)
zf-H2C2_2 439..464 CDD:290200 9/24 (38%)
C2H2 Zn finger 455..475 CDD:275368 9/19 (47%)
Zfp78NP_001020334.1 KRAB 14..73 CDD:214630
COG5048 202..>487 CDD:227381 91/277 (33%)
C2H2 Zn finger 207..227 CDD:275368 1/1 (100%)
C2H2 Zn finger 235..255 CDD:275368 5/19 (26%)
C2H2 Zn finger 263..283 CDD:275368 6/22 (27%)
C2H2 Zn finger 291..311 CDD:275368 4/19 (21%)
C2H2 Zn finger 319..339 CDD:275368 7/19 (37%)
C2H2 Zn finger 347..367 CDD:275368 5/19 (26%)
C2H2 Zn finger 375..395 CDD:275368 7/19 (37%)
C2H2 Zn finger 403..423 CDD:275368 5/19 (26%)
C2H2 Zn finger 431..451 CDD:275368 9/19 (47%)
C2H2 Zn finger 459..479 CDD:275368 7/20 (35%)
C2H2 Zn finger 487..507 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836706
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.