DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2712 and Zfp46

DIOPT Version :9

Sequence 1:NP_570028.1 Gene:CG2712 / 31267 FlyBaseID:FBgn0024975 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001357580.1 Gene:Zfp46 / 22704 MGIID:99192 Length:470 Species:Mus musculus


Alignment Length:389 Identity:115/389 - (29%)
Similarity:173/389 - (44%) Gaps:57/389 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 DDQE---VTEYPAETIR----DEEQLLVVESDEAESRLEAPIVQEERLDIALEQHED-------- 174
            ||.|   ::|.|.|...    .||   ..||.:...|....:..||.:...|:|..|        
Mouse    71 DDVEFATMSEEPLENAEKNPGSEE---AFESGDQAERPWGDLTAEEWVSYPLQQVTDLLVHKEAH 132

  Fly   175 -----DLC--------EIVDDPDPEQRRSRLERSEPALQCPICGKQLARKRTFQYHMRLH-GQPK 225
                 .:|        :|.|    ..|..:....:...:|..|||..:|......|.|.| |:  
Mouse   133 AGIRYHICSQCGKAFSQISD----LNRHQKTHTGDRPYKCYECGKGFSRSSHLIQHQRTHTGE-- 191

  Fly   226 IRQEDNDHCIEECLQVEPVLQAK---AGEDVYEIVE------KSAQTSATQKTLPSGSRPWKPLN 281
             |..|.:.|.:...:...::|.:   .||..::..|      :.:.....|:| .||.:|:    
Mouse   192 -RPYDCNECGKSFGRSSHLIQHQTIHTGEKPHKCTECGKSFCRLSHLIQHQRT-HSGEKPY---- 250

  Fly   282 PSLQCKICGKQLSTNNSFKYHMQLHGTATPYVCTICGESFKTRNARDGHVTLHDRNNPNRCPTCF 346
               :|:.|||..|.::....|.:.|....||.|..||..|..|:....|..:|....|.:|..|.
Mouse   251 ---ECEECGKSFSRSSHLAQHQRTHTGEKPYECHECGRGFSERSDLIKHYRVHTGERPYKCDECG 312

  Fly   347 KVYRQASSLRTHLLIHSGIKPFECSICGKRLTQKSGYKKHMLTHTGEKPHGCDICGRRFRYSSNL 411
            |.:.|.|.|..|...|:|.||:.|:.||:..::.|...:|..|||||||:.|..||:.|..||:|
Mouse   313 KNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGEKPYECTACGKSFSRSSHL 377

  Fly   412 IAHKRCHSQEKPHPCPVCQKRSFGSTSELNRHMLVHSSERPFGCEQCGKSFKRRISLAIHRQSH 475
            |.|::.|:.|||:.|..|. ||||..|:|.:|...|:.|:|:.|.||||.|.:..:|..|::.|
Mouse   378 ITHQKIHTGEKPYECNECW-RSFGERSDLIKHQRTHTGEKPYECVQCGKGFTQSSNLITHQRVH 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2712NP_570028.1 zf-AD 13..92 CDD:214871
C2H2 Zn finger 286..306 CDD:275368 6/19 (32%)
C2H2 Zn finger 314..334 CDD:275368 6/19 (32%)
C2H2 Zn finger 342..362 CDD:275368 7/19 (37%)
zf-H2C2_2 354..379 CDD:290200 9/24 (38%)
C2H2 Zn finger 370..390 CDD:275368 5/19 (26%)
COG5048 378..>463 CDD:227381 39/84 (46%)
zf-H2C2_2 384..407 CDD:290200 12/22 (55%)
C2H2 Zn finger 398..418 CDD:275368 9/19 (47%)
C2H2 Zn finger 426..447 CDD:275368 9/20 (45%)
zf-H2C2_2 439..464 CDD:290200 11/24 (46%)
C2H2 Zn finger 455..475 CDD:275368 8/19 (42%)
Zfp46NP_001357580.1 KRAB 13..54 CDD:366587
C2H2 Zn finger 140..160 CDD:275368 4/23 (17%)
COG5048 163..>470 CDD:227381 95/290 (33%)
C2H2 Zn finger 168..188 CDD:275368 7/19 (37%)
C2H2 Zn finger 196..216 CDD:275368 2/19 (11%)
C2H2 Zn finger 224..244 CDD:275368 3/20 (15%)
C2H2 Zn finger 252..272 CDD:275368 6/19 (32%)
C2H2 Zn finger 280..300 CDD:275368 6/19 (32%)
C2H2 Zn finger 308..328 CDD:275368 7/19 (37%)
C2H2 Zn finger 336..356 CDD:275368 5/19 (26%)
C2H2 Zn finger 364..384 CDD:275368 9/19 (47%)
C2H2 Zn finger 392..412 CDD:275368 9/20 (45%)
C2H2 Zn finger 420..440 CDD:275368 8/19 (42%)
C2H2 Zn finger 448..468 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24381
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.