DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2712 and Zfp617

DIOPT Version :9

Sequence 1:NP_570028.1 Gene:CG2712 / 31267 FlyBaseID:FBgn0024975 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_006253017.1 Gene:Zfp617 / 100361660 RGDID:2319713 Length:423 Species:Rattus norvegicus


Alignment Length:289 Identity:84/289 - (29%)
Similarity:137/289 - (47%) Gaps:28/289 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 QCPICGKQLARKRTFQYHMRLHGQPK-------IRQEDNDHCIEECLQVEPVLQAKAGEDVYE-- 255
            :|.:|||......:.:.|.:.|...|       .:.....:|::..:...       ..|.|:  
  Rat   124 ECKMCGKVFMCLGSLKKHKKTHSGEKPYKCKYCEKAFSYRYCVDRHMLTH-------NTDRYKCR 181

  Fly   256 IVEKSAQTSAT---QKTLPSGSRPWKPLNPSLQCKICGKQLSTNNSFKYHMQLHGTATPYVCTIC 317
            :..|:...:..   .|.:.||..|        :||.||:...|::|...|.:||.|...|.|..|
  Rat   182 VCRKTFSNAIALREHKAIHSGEIP--------ECKECGRMFWTSSSLDLHKRLHTTEKLYECKHC 238

  Fly   318 GESFKTRNARDGHVTLHDRNNPNRCPTCFKVYRQASSLRTHLLIHSGIKPFECSICGKRLTQKSG 382
            |::|....:...|...|....|..|..|.|.:|.:|.::.|..||:|.||:||..|||..|....
  Rat   239 GKAFTGYCSFQLHKRTHTGEKPYECKQCGKTFRHSSHVQAHKRIHTGEKPYECMQCGKTFTSGHC 303

  Fly   383 YKKHMLTHTGEKPHGCDICGRRFRYSSNLIAHKRCHSQEKPHPCPVCQKRSFGSTSELNRHMLVH 447
            .::|:.||:|..|:.|::||:.:.|..:|..||:||::||.:.|..|.| :|...|.|..|...|
  Rat   304 ARRHLGTHSGAWPYKCEVCGKAYPYVYSLRNHKKCHNEEKLYECKQCGK-AFKCISSLRNHETTH 367

  Fly   448 SSERPFGCEQCGKSFKRRISLAIHRQSHK 476
            :.|:|:.|::|||:|.....:..|.::||
  Rat   368 TGEKPYECKECGKAFSCPSYIQNHMRTHK 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2712NP_570028.1 zf-AD 13..92 CDD:214871
C2H2 Zn finger 286..306 CDD:275368 7/19 (37%)
C2H2 Zn finger 314..334 CDD:275368 5/19 (26%)
C2H2 Zn finger 342..362 CDD:275368 6/19 (32%)
zf-H2C2_2 354..379 CDD:290200 11/24 (46%)
C2H2 Zn finger 370..390 CDD:275368 6/19 (32%)
COG5048 378..>463 CDD:227381 31/84 (37%)
zf-H2C2_2 384..407 CDD:290200 8/22 (36%)
C2H2 Zn finger 398..418 CDD:275368 7/19 (37%)
C2H2 Zn finger 426..447 CDD:275368 7/20 (35%)
zf-H2C2_2 439..464 CDD:290200 10/24 (42%)
C2H2 Zn finger 455..475 CDD:275368 6/19 (32%)
Zfp617XP_006253017.1 KRAB 4..>44 CDD:214630
KRAB 4..43 CDD:279668
C2H2 Zn finger 125..145 CDD:275368 5/19 (26%)
zf-H2C2_2 137..162 CDD:290200 3/24 (13%)
COG5048 <149..307 CDD:227381 44/172 (26%)
C2H2 Zn finger 153..173 CDD:275368 1/19 (5%)
C2H2 Zn finger 180..200 CDD:275368 2/19 (11%)
C2H2 Zn finger 207..227 CDD:275368 7/19 (37%)
C2H2 Zn finger 235..255 CDD:275368 5/19 (26%)
zf-H2C2_2 247..272 CDD:290200 6/24 (25%)
COG5048 <259..418 CDD:227381 52/139 (37%)
C2H2 Zn finger 263..283 CDD:275368 6/19 (32%)
zf-H2C2_2 275..300 CDD:290200 11/24 (46%)
C2H2 Zn finger 291..311 CDD:275368 6/19 (32%)
C2H2 Zn finger 319..339 CDD:275368 7/19 (37%)
C2H2 Zn finger 347..367 CDD:275368 7/20 (35%)
zf-H2C2_2 359..384 CDD:290200 10/24 (42%)
C2H2 Zn finger 375..395 CDD:275368 6/19 (32%)
C2H2 Zn finger 402..422 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24381
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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