DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and TIM50

DIOPT Version :9

Sequence 1:NP_001303557.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_015262.1 Gene:TIM50 / 856042 SGDID:S000005984 Length:476 Species:Saccharomyces cerevisiae


Alignment Length:395 Identity:121/395 - (30%)
Similarity:195/395 - (49%) Gaps:63/395 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LPAAAPALFSILHTAR---GYSSTTKQEAGATGPNDAPEVAPNAPLLAKL-----------FPQT 115
            :|:||..|.|:..:.|   .|||..::|.    .:|.|:......:|.|.           ..:|
Yeast    19 VPSAANTLTSVQASRRLLTSYSSFLQKET----KDDKPKSILTDDMLFKAGVDVDEKGQGKNEET 79

  Fly   116 S-------PEVDSNAEQERKKREEEEEKENER--AWKRMKLGFAIFGGSAVAAGFWAVY---EFG 168
            |       .|..|.:|:.|:||:...:.:.|:  .|      |.||..||:..  .|:|   ::.
Yeast    80 SGEGGEDKNEPSSKSEKSRRKRQTSTDIKREKYANW------FYIFSLSALTG--TAIYMARDWE 136

  Fly   169 KPEVDPNGQPIEDEFTHKPLVQQYLQRMWKSIHYYQRMIQEPSRAKLLPDPLKPPYVQPRYTLVL 233
            ..|.:...:.|::.:|...:.:::..|......|:    |||....|||.|..|||.:| .|||:
Yeast   137 PQESEELKKDIDNGYTLSLMYKRFKARFNSMFTYF----QEPPFPDLLPPPPPPPYQRP-LTLVI 196

  Fly   234 EMKDVLVHPDWTYQTGWRFKKRPGVDHFLAECAKDFEIVVFTAEQGMTVFPILDALDP-NGYIMY 297
            .::|.|||.:|:.:.|||..||||.|:||...::.:|||:|::...|....|.:.||| :.::.|
Yeast   197 TLEDFLVHSEWSQKHGWRTAKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSY 261

  Fly   298 RLVRDATHFVDGHHVKNLDNLNRDLKKVIVVDWDANATKMHPDNTFGLARWHGNDDDGQLLDLIA 362
            .|.::...:.||.|:|:|..|||||.|||::|.|.|:.|:.|:|...:..|:|..|| :|:.||.
Yeast   262 NLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEPWNGEADD-KLVRLIP 325

  Fly   363 FLKIIAQNNVDDVREVLHYYRQFDDPINQFRENQRKLAEQMLEAERIEQSKTK-----PMVKQWS 422
            ||:.:|.....|||.:|          |.| |:::.|||:.  ..|:::.|.|     .....|:
Yeast   326 FLEYLATQQTKDVRPIL----------NSF-EDKKNLAEEF--DHRVKKLKDKFYGDHKSGGNWA 377

  Fly   423 RNILG 427
            ...||
Yeast   378 MTALG 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_001303557.1 CPDc 227..355 CDD:214729 52/128 (41%)
TIM50NP_015262.1 FCP1 1..354 CDD:227517 114/363 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 124 1.000 Domainoid score I1200
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 156 1.000 Inparanoid score I1077
Isobase 1 0.950 - 0.917438 Normalized mean entropy S1903
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003614
OrthoInspector 1 1.000 - - otm46699
orthoMCL 1 0.900 - - OOG6_102279
Panther 1 1.100 - - LDO PTHR12210
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1522
SonicParanoid 1 1.000 - - X2489
TreeFam 1 0.960 - -
1312.800

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