DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and TIM50

DIOPT Version :9

Sequence 1:NP_001303557.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_175986.2 Gene:TIM50 / 842040 AraportID:AT1G55900 Length:376 Species:Arabidopsis thaliana


Alignment Length:389 Identity:114/389 - (29%)
Similarity:183/389 - (47%) Gaps:76/389 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LRLFTCTALPAAAPALFSILHTARGYSSTTKQEAGATGPNDAPEVAPNAPLLAKLFPQTSPEVDS 121
            ||.|:..|....:.:.:|      |.:||....:....||..|             |...|:|::
plant    22 LRCFSAEASSTNSTSRYS------GVTSTQSMFSDFPPPNQPP-------------PPPPPQVEA 67

  Fly   122 NAEQERKKREEEEEKENERAWKRMK-LGFAI---FGGSAVAAGFWAVYEFGKPEVDPNGQPIEDE 182
            .|.....|         ||  |.:| ||:|:   ..|:..|.|: |.:.:...||:...:...:.
plant    68 AAAAATGK---------ER--KGLKYLGYALLWALTGATAATGY-ASFAYTIDEVNEKTKAFRES 120

  Fly   183 FTHKPLVQ--------QYLQRMW--------KSIHYYQRM----------IQEPSRAKLLPDPLK 221
            .|..|:::        :|..:::        ::|..|..:          ..||...|||||  .
plant   121 ATKTPVIKSSGIDVIDKYQTKLYSAAMTGSARAIDKYLELREIVEEQVKGFTEPLSEKLLPD--L 183

  Fly   222 PPYVQPRYTLVLEMKDVLVHPDWTYQTGWRFKKRPGVDHFLAECAKDFEIVVFTAEQGMTVFPIL 286
            .|..|..:||||::.:.|::.||..:.|||..||||||.||....|.:||||::.:..|.|.|:.
plant   184 HPAEQHVFTLVLDLNETLLYTDWKRERGWRTFKRPGVDAFLEHLGKFYEIVVYSDQMEMYVLPVC 248

  Fly   287 DALDPNGYIMYRLVRDATHFVDGHHVKNLDNLNRDLKKVIVVDWDANATKMHPDNTFGLARWHGN 351
            :.|||||||.|:|.|.||.:.:|.|.::|..||||.||::.|..:|..:.:.|:|:..:..:...
plant   249 EKLDPNGYIRYKLARGATKYENGKHYRDLSKLNRDPKKILFVSANAFESTLQPENSVPIKPYKLE 313

  Fly   352 DDDGQLLDLIAFLKIIAQNNVDDVREVLHYYRQFDDPINQFRENQRKLAEQMLEAERIEQSKTK 415
            .||..|:|||.||:.:|:|:..|:|.||..:.:.|            :|::.:: ..||..|.|
plant   314 ADDTALVDLIPFLEYVARNSPADIRPVLASFERKD------------IAKEFID-RSIEYQKRK 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_001303557.1 CPDc 227..355 CDD:214729 52/127 (41%)
TIM50NP_175986.2 NIF 191..338 CDD:281081 62/146 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 132 1.000 Domainoid score I1664
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 141 1.000 Inparanoid score I1782
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1142452at2759
OrthoFinder 1 1.000 - - FOG0003614
OrthoInspector 1 1.000 - - otm3534
orthoMCL 1 0.900 - - OOG6_102279
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2489
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.730

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