DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and CPL2

DIOPT Version :10

Sequence 1:NP_570027.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001190199.1 Gene:CPL2 / 831743 AraportID:AT5G01270 Length:774 Species:Arabidopsis thaliana


Alignment Length:282 Identity:60/282 - (21%)
Similarity:103/282 - (36%) Gaps:115/282 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 EVDP---NGQPIE-----DEFTHKPLVQQYLQRMWKSIHYYQRMIQEPSRAKLLPDPLKP----- 222
            |:||   ||...|     |:   :.|::||:...:        ........|..|:.::|     
plant   172 EMDPVRINGMSAELKRYMDD---RMLLKQYIDNDY--------AFDNGVLLKAQPEEVRPTSDGQ 225

  Fly   223 -----PYVQ-PRYTLVL-----EMKD----VLVHPDW----TYQTGWRFKKRPGVDHFLAECAKD 268
                 |.:: |....||     |::|    |.:.|.|    :|.|              |:..|.
plant   226 EKVCRPVIRLPEKNTVLTRIKPEIRDTSVLVKLRPAWEELRSYLT--------------AKTRKR 276

  Fly   269 FEIVVFT-AEQGMTVFPILDALDPNGYIMYRLVRDATHFVDGHHVKNLDNLNRDLKKVIVVDWDA 332
            ||:.|.| ||:..       ||:     |:||:....|.:.   :|.|    ||  :::.|..||
plant   277 FEVYVCTMAERDY-------ALE-----MWRLLDPEAHLIS---LKEL----RD--RIVCVKPDA 320

  Fly   333 --------NATKMHP------DNTFGLARWHGNDDDGQLLDLI-AFLK---------------II 367
                    |....||      |:...:  |  .|.|...:.:: |:|.               .:
plant   321 KKSLLSVFNGGICHPKMAMVIDDRMKV--W--EDKDQPRVHVVSAYLPYYAPQAETALVVPHLCV 381

  Fly   368 AQNNVDDVREVLHYYRQFDDPI 389
            |:|...:||.  :::::||:.:
plant   382 ARNVACNVRG--YFFKEFDESL 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_570027.1 CPDc 227..355 CDD:214729 37/155 (24%)
CPL2NP_001190199.1 HAD_FCP1-like <244..355 CDD:319823 35/149 (23%)
DSRM_RNAse_III_family 657..720 CDD:380682
Blue background indicates that the domain is not in the aligned region.

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