DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and Ctdspl

DIOPT Version :9

Sequence 1:NP_001303557.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_598471.3 Gene:Ctdspl / 69274 MGIID:1916524 Length:276 Species:Mus musculus


Alignment Length:287 Identity:76/287 - (26%)
Similarity:127/287 - (44%) Gaps:53/287 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 SNAEQERKKREEEEEKENER--AWKRMKLGFAIFGGSAVAAGFWAVYEFGKPEVDPNGQPIEDEF 183
            :|.:::..:.....||.::|  :.|:.:       |.::.:.|:..:.....|..|...|    .
Mouse    11 TNPKEDEARSPVAGEKASQRNISLKKQR-------GRSILSSFFCCFRDYNVEAPPANSP----S 64

  Fly   184 THKPLVQQYLQRMWKSIHYYQRMIQEPSRAKLLPDPLKPP--YVQPRYT--------LVLEMKDV 238
            ...|||::            ...:|:..:.:::|.| .||  |:.|..|        :|:::.:.
Mouse    65 VLPPLVEE------------NGGLQKGDQRQVIPVP-SPPAKYLLPEVTVLDYGKKCVVIDLDET 116

  Fly   239 LVHPDWTYQTGWRF---------------KKRPGVDHFLAECAKDFEIVVFTAEQGMTVFPILDA 288
            |||..:...:...|               .|||.||.||....:.||.|:|||.......|:.|.
Mouse   117 LVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADL 181

  Fly   289 LDPNGYIMYRLVRDATHFVDGHHVKNLDNLNRDLKKVIVVDWDANATKMHPDNTFGLARWHGNDD 353
            ||..|....||.|::..|..|::||:|..|.|:|.|||:||....:...||:|...:..|..:..
Mouse   182 LDRWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMT 246

  Fly   354 DGQLLDLIAFLKIIAQNNVDDVREVLH 380
            |.:|||||.|.:.:::.  |||..:||
Mouse   247 DTELLDLIPFFEGLSRE--DDVYSMLH 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_001303557.1 CPDc 227..355 CDD:214729 45/150 (30%)
CtdsplNP_598471.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 3/19 (16%)
FCP1 <95..270 CDD:227517 55/176 (31%)
HIF-SF_euk 106..265 CDD:274055 50/160 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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