DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and Ctdp1

DIOPT Version :9

Sequence 1:NP_001303557.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_080571.2 Gene:Ctdp1 / 67655 MGIID:1926953 Length:960 Species:Mus musculus


Alignment Length:294 Identity:61/294 - (20%)
Similarity:98/294 - (33%) Gaps:82/294 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 TKQEAGATGPNDAPEVAPNAPLLAKLFPQTSP-----EVDSNAEQER-----------KKREEEE 134
            ||.....:||.|.......|..|.:..|...|     ::|:..|.||           .::|.|.
Mouse   482 TKAAPEHSGPQDTSGGRAAASPLGESGPSIHPHDKGSDLDTQEEGERDSLCGLGNGSVDRKEAET 546

  Fly   135 EKENERAWKRMKLGFAIFGGSAVAAGFWAVYEFGKPEVDPNGQPIEDEFTH--KPLVQQYLQRMW 197
            |.:|...             |.|.||.......|:.|.:....  :|...|  :.||:.:.....
Mouse   547 ESQNSEQ-------------SGVTAGESLDQSVGEEEEEDTDD--DDHLIHLEEILVRVHTDYYT 596

  Fly   198 KSIHYYQRMIQE-PSRAKLLPDPLKPPYVQPRYTLVLEMKDVLVHPDWTYQTGWRFKKRPGVDHF 261
            |...|..:.::| |...|::|: ||...          :.||.|.....:.|.:..:|.....|.
Mouse   597 KYDRYLNKELEEAPDIRKIVPE-LKSKV----------LADVAVIFSGLHPTNFPVEKTREHYHA 650

  Fly   262 LAECAKDFEIVVFTAEQGMTVFPILDALDPNGYIM--------YRLVRDATHFVDGHHVKNLDNL 318
            .|..||....:|.:.          ||.|...:::        .|..::..|.    ||.:.|.|
Mouse   651 TALGAKVLTQLVLSP----------DAPDRATHLIAARAGTEKVRQAQECKHL----HVVSPDWL 701

  Fly   319 NRDLKKVIVVDWDA----------NATKMHPDNT 342
            ...|::     ||.          :.|:.|.||:
Mouse   702 WSCLER-----WDKVEEQLFPLIDDDTRTHRDNS 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_001303557.1 CPDc 227..355 CDD:214729 26/134 (19%)
Ctdp1NP_080571.2 biotinyl_domain 27..111 CDD:133459
FCP1_euk 177..323 CDD:131304
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..580 24/112 (21%)
BRCT 637..706 CDD:237994 16/82 (20%)
FCP1_C 706..960 CDD:286402 6/30 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 770..834
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 854..948
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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