DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and Ctdnep1

DIOPT Version :10

Sequence 1:NP_570027.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_080293.1 Gene:Ctdnep1 / 67181 MGIID:1914431 Length:244 Species:Mus musculus


Alignment Length:268 Identity:70/268 - (26%)
Similarity:109/268 - (40%) Gaps:64/268 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 LGFAIFGGSAVAAGFWAVYEFGKPEVDPNGQPIEDEFTHKPLVQQYLQRMWKSIHYYQRMIQEPS 211
            ||...|  .|.||..|:.:.:                        .|:|..:::..||.:     
Mouse     8 LGLRTF--VAFAAKLWSFFIY------------------------LLRRQIRTVIQYQTV----- 41

  Fly   212 RAKLLP-DPLKPPYVQ--PRYTLVLEMKDVLVH----------------PDWTYQT-----GWRF 252
            |..:|| .||....:.  .|..|||::.:.|:|                ||:..:.     ..||
Mouse    42 RYDILPLSPLSRNRLAQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRF 106

  Fly   253 --KKRPGVDHFLAECAKDFEIVVFTAEQGMTVFPILDALDPNGYIM-YRLVRDATHFVDGHHVKN 314
              .|||.||.||...::.:|:|||||...:....:.|.||.:..|: .|..|.......|.::|:
Mouse   107 FVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKD 171

  Fly   315 LDNLNRDLKKVIVVDWDANATKMHPDNTFGLARWHGNDDDGQLLDLIAFLKIIAQNNVDDVREV- 378
            |..::.||..::::|....|.:.||||...:..|..:..|..||:|:..|.  |.....|||.| 
Mouse   172 LSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLD--ALRFTADVRSVL 234

  Fly   379 ---LHYYR 383
               ||.:|
Mouse   235 SRNLHQHR 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_570027.1 CPDc 227..355 CDD:214729 41/151 (27%)
Ctdnep1NP_080293.1 HIF-SF_euk 61..229 CDD:274055 47/169 (28%)

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