DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ttm50 and Timm50

DIOPT Version :9

Sequence 1:NP_001303557.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_079892.1 Gene:Timm50 / 66525 MGIID:1913775 Length:353 Species:Mus musculus


Alignment Length:350 Identity:148/350 - (42%)
Similarity:206/350 - (58%) Gaps:21/350 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 AAAPALFSILHTARGYSSTTKQEAGATGPNDAPEVAPNAPLLAKLFPQTSPEVDSNAEQERKKRE 131
            ||:.||||.|.:.        ...||.|.  ...:||..|..    |:...|:.:....:.:..:
Mouse     2 AASAALFSRLRSG--------LRVGARGL--CTRLAPPPPRT----PEQVTEIANRGGSKAQGPQ 52

  Fly   132 EEEEKENERAWKRMKLGFA-IFGGSAVAAGFWAVYEFGKPEVDPNGQPIEDEFTHKPLVQQYLQR 195
            .:...|.....|::.|..| :.|.....:   .||.||...||.||..|.|||...|::.|.|:|
Mouse    53 HQPGSEGPSYAKKIALWIAGLLGAGGTVS---IVYIFGNNPVDENGTKIPDEFDSDPILVQQLRR 114

  Fly   196 MWKSIHYYQRMIQEPSRAKLLPDPLKPPYVQPRYTLVLEMKDVLVHPDWTYQTGWRFKKRPGVDH 260
            .:|....|::||.||:...||||||:.||.||.||||||:..||:||:|:..||||||||||::.
Mouse   115 TYKYFKDYRQMIIEPTSPCLLPDPLREPYYQPPYTLVLELTGVLLHPEWSLATGWRFKKRPGIET 179

  Fly   261 FLAECAKDFEIVVFTAEQGMTVFPILDALDPNGYIMYRLVRDATHFVDGHHVKNLDNLNRDLKKV 325
            ...:.|..:|||:||:|.|||.||::|::||:|:|.|||.||||.:::|||||::..||||..:|
Mouse   180 LFQQLAPLYEIVIFTSETGMTAFPLIDSVDPHGFISYRLFRDATRYMEGHHVKDISCLNRDPARV 244

  Fly   326 IVVDWDANATKMHPDNTFGLARWHGNDDDGQLLDLIAFLKIIAQNNVDDVREVLHYYRQFDDPIN 390
            :|||....|.::.|.|...|..|.||.||..||||.||||.||.|.|:|||.||.:|...|||:.
Mouse   245 VVVDCKKEAFRLQPFNGVALRPWDGNSDDRVLLDLSAFLKTIALNQVEDVRTVLEHYALEDDPLE 309

  Fly   391 QFRENQRKLAEQMLEAERI-EQSKT 414
            .|::.|.:|.::  |.:|: |.||:
Mouse   310 AFKQRQSRLEQE--EQQRLAELSKS 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_001303557.1 CPDc 227..355 CDD:214729 67/127 (53%)
Timm50NP_079892.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..59 5/39 (13%)
NIF 148..295 CDD:281081 80/146 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844427
Domainoid 1 1.000 178 1.000 Domainoid score I3538
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H57031
Inparanoid 1 1.050 260 1.000 Inparanoid score I3098
Isobase 1 0.950 - 0.917438 Normalized mean entropy S1903
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003614
OrthoInspector 1 1.000 - - otm42956
orthoMCL 1 0.900 - - OOG6_102279
Panther 1 1.100 - - LDO PTHR12210
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1522
SonicParanoid 1 1.000 - - X2489
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.730

Return to query results.
Submit another query.