DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and ctdspl2a

DIOPT Version :9

Sequence 1:NP_001303557.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001071012.1 Gene:ctdspl2a / 558181 ZFINID:ZDB-GENE-061013-647 Length:469 Species:Danio rerio


Alignment Length:373 Identity:82/373 - (21%)
Similarity:146/373 - (39%) Gaps:99/373 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 PAAAP------ALFSILHTARGYSSTTKQEAGATGPNDAPEVAPNAPLLAK-------------- 110
            |::.|      .:||.:     :|..:.....||..:|:|..|..|..:.|              
Zfish   131 PSSPPRTTLLGTIFSPV-----FSFFSPANKNATAGSDSPGQAVEAEEIVKQLDMEQLEETPTST 190

  Fly   111 ------------LFPQTSPEVDSNAEQERKKREEEEEKENERAWKRMKLGFAIFGGSAVAAGFWA 163
                        |.|:..|.:|:..|:.....|.:..                   ...|.|..:
Zfish   191 TTDGRDLTFDPALNPRPLPHIDTTVEEGEIVTEADMP-------------------PLTAVGSNS 236

  Fly   164 VYEFGKPEVDPNGQPIEDEFTHKPLVQQYLQRMWKSI--HYYQRMIQEPSRAKLLPDPLKPPYVQ 226
            .|    |:|.|: .|.|..:          :..|:..  :::.:.:...:..:|...|..|...:
Zfish   237 NY----PDVPPS-PPAEGTY----------EEDWEVFDPYFFIKHVPPLTEEQLTRKPALPLKTR 286

  Fly   227 --PRYTLVLEMKDVLVH-----------------PDWTYQTGWRFKKRPGVDHFLAECAKDFEIV 272
              |.::|||::.:.|||                 .|..||...|.  ||....||...::.:||:
Zfish   287 STPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIYQVYVRL--RPFFREFLERMSQIYEII 349

  Fly   273 VFTAEQGMTVFPILDALDPNGYIM-YRLVRDATHFVDGHHVKNLDNLNRDLKKVIVVDWDANATK 336
            :|||.:.:....:|:.|||...:: :||.|:....|.|:::|:|:.|.|||.|.:::|....|..
Zfish   350 LFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTVIIDNSPQAFA 414

  Fly   337 MHPDNTFGLARWHGNDDDGQLLDLIAFLKIIAQNNVDDVREVLHYYRQ 384
            ....|...:..|..:.:|.:||.|:.||:.:.:.| :|||.   |.|:
Zfish   415 YQLSNGIPIESWFVDKNDNELLKLVPFLEKLVELN-EDVRP---YIRE 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_001303557.1 CPDc 227..355 CDD:214729 40/145 (28%)
ctdspl2aNP_001071012.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..136 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..209 2/27 (7%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 231..250 8/23 (35%)
HIF-SF_euk 290..445 CDD:274055 45/156 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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