DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and ctdspl2a

DIOPT Version :10

Sequence 1:NP_570027.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001071012.1 Gene:ctdspl2a / 558181 ZFINID:ZDB-GENE-061013-647 Length:469 Species:Danio rerio


Alignment Length:373 Identity:82/373 - (21%)
Similarity:146/373 - (39%) Gaps:99/373 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 PAAAP------ALFSILHTARGYSSTTKQEAGATGPNDAPEVAPNAPLLAK-------------- 110
            |::.|      .:||.:     :|..:.....||..:|:|..|..|..:.|              
Zfish   131 PSSPPRTTLLGTIFSPV-----FSFFSPANKNATAGSDSPGQAVEAEEIVKQLDMEQLEETPTST 190

  Fly   111 ------------LFPQTSPEVDSNAEQERKKREEEEEKENERAWKRMKLGFAIFGGSAVAAGFWA 163
                        |.|:..|.:|:..|:.....|.:..                   ...|.|..:
Zfish   191 TTDGRDLTFDPALNPRPLPHIDTTVEEGEIVTEADMP-------------------PLTAVGSNS 236

  Fly   164 VYEFGKPEVDPNGQPIEDEFTHKPLVQQYLQRMWKSI--HYYQRMIQEPSRAKLLPDPLKPPYVQ 226
            .|    |:|.|: .|.|..:          :..|:..  :::.:.:...:..:|...|..|...:
Zfish   237 NY----PDVPPS-PPAEGTY----------EEDWEVFDPYFFIKHVPPLTEEQLTRKPALPLKTR 286

  Fly   227 --PRYTLVLEMKDVLVH-----------------PDWTYQTGWRFKKRPGVDHFLAECAKDFEIV 272
              |.::|||::.:.|||                 .|..||...|.  ||....||...::.:||:
Zfish   287 STPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIYQVYVRL--RPFFREFLERMSQIYEII 349

  Fly   273 VFTAEQGMTVFPILDALDPNGYIM-YRLVRDATHFVDGHHVKNLDNLNRDLKKVIVVDWDANATK 336
            :|||.:.:....:|:.|||...:: :||.|:....|.|:::|:|:.|.|||.|.:::|....|..
Zfish   350 LFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTVIIDNSPQAFA 414

  Fly   337 MHPDNTFGLARWHGNDDDGQLLDLIAFLKIIAQNNVDDVREVLHYYRQ 384
            ....|...:..|..:.:|.:||.|:.||:.:.:.| :|||.   |.|:
Zfish   415 YQLSNGIPIESWFVDKNDNELLKLVPFLEKLVELN-EDVRP---YIRE 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_570027.1 CPDc 227..355 CDD:214729 40/145 (28%)
ctdspl2aNP_001071012.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..136 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..209 2/27 (7%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 231..250 8/23 (35%)
HIF-SF_euk 290..445 CDD:274055 45/156 (29%)
Blue background indicates that the domain is not in the aligned region.

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