DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and ctdnep1b

DIOPT Version :9

Sequence 1:NP_001303557.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001007441.2 Gene:ctdnep1b / 492799 ZFINID:ZDB-GENE-041114-152 Length:248 Species:Danio rerio


Alignment Length:267 Identity:67/267 - (25%)
Similarity:114/267 - (42%) Gaps:62/267 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 LGFAIFGGSAVAAGFWAVYEFGKPEVDPNGQPIEDEFTHKPLVQQYLQRM--WKSIHYYQRMIQE 209
            ||...|.|  |.:..|:.:.:                    :::::::.:  ::::.|....:..
Zfish    12 LGVRTFLG--VTSRIWSFFLY--------------------ILRKHIRTIIQYQTVRYDVLSLSP 54

  Fly   210 PSRAKLLPDPLKPPYVQPRYTLVLEMKDVLVH----------------PDWTYQT-----GWRF- 252
            .||.:|  :.:|      |..|||::.:.|:|                ||:..:.     ..|| 
Zfish    55 ISRNRL--NNVK------RKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFF 111

  Fly   253 -KKRPGVDHFLAECAKDFEIVVFTAEQGMTVFPILDALDPNGYIM-YRLVRDATHFVDGHHVKNL 315
             .|||.||.||...::.:|:|||||...:....:.|.||.|..|: .|..|.......|.::|:|
Zfish   112 VHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNKAILKRRYYRQHCTLDSGSYIKDL 176

  Fly   316 DNLNRDLKKVIVVDWDANATKMHPDNTFGLARWHGNDDDGQLLDLIAFLKIIAQNNVDDVREV-- 378
            ..::.||..|:::|....|.:.||||...:..|..:..|..||:|:..|.  |.....|||.|  
Zfish   177 SVVHDDLSSVVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLD--ALRFTADVRSVLS 239

  Fly   379 --LHYYR 383
              ||.:|
Zfish   240 RNLHQHR 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_001303557.1 CPDc 227..355 CDD:214729 43/151 (28%)
ctdnep1bNP_001007441.2 HIF-SF_euk 65..233 CDD:274055 49/169 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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