DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and timm50

DIOPT Version :9

Sequence 1:NP_001303557.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_956959.1 Gene:timm50 / 393638 ZFINID:ZDB-GENE-040426-1618 Length:387 Species:Danio rerio


Alignment Length:370 Identity:158/370 - (42%)
Similarity:218/370 - (58%) Gaps:25/370 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 AAAPALFSILHTARGYSSTTKQEAGATGPNDAPEVAPNAPLLAKLFPQTSPEVDSNAEQERKKRE 131
            :.||.|..::   |..|:.| ..:.|||......:........|...|..||.:.:..::.::.|
Zfish    27 STAPPLLDVV---RPLSADT-SSSSATGGLAQAILQERLQQQQKSQEQPPPEGEDSGHKQDEQGE 87

  Fly   132 EEEEKENERAWKRMKLGFAIFGGSAVAAGFWAVYEFGKPEVDPNGQPIEDEFTHK-PLVQQYLQR 195
            ::::|||....|:|.|..|...|.....|.  ||.||...||..|..|.|||.:. |::|| |:|
Zfish    88 DKKQKENTAYAKKMVLRLAGIMGLGGTVGI--VYIFGSNSVDEQGNKIPDEFDNDVPVIQQ-LRR 149

  Fly   196 MWKSIHYYQRMIQEPSRAKLLPDPLKPPYVQPRYTLVLEMKDVLVHPDWTYQTGWRFKKRPGVDH 260
            .:|....|::||.||:..|||||||:.||.||.||||||:.|||:||:|:..||||||||||:|:
Zfish   150 TFKYFKDYRQMIIEPTSPKLLPDPLREPYYQPPYTLVLELTDVLLHPEWSLATGWRFKKRPGIDY 214

  Fly   261 FLAECAKDFEIVVFTAEQGMTVFPILDALDPNGYIMYRLVRDATHFVDGHHVKNLDNLNRDLKKV 325
            ...:.|..:|||:||:|.|||.:|::|::||.|::||||.||||.:::|||||::..||||..||
Zfish   215 LFQQLAPLYEIVIFTSETGMTAYPLIDSIDPQGFVMYRLFRDATRYMEGHHVKDVSCLNRDTSKV 279

  Fly   326 IVVDWDANATKMHPDNTFGLARWHGNDDDGQLLDLIAFLKIIAQNNVDDVREVLHYYRQFDDPIN 390
            ||||....|..:.|.|...|.:|.||.:|..|.||.||||.||.:.|:|||.||..|...:|||.
Zfish   280 IVVDCKREAFGLQPFNGLALCKWDGNSEDRTLYDLAAFLKTIATSGVEDVRSVLENYAHEEDPIE 344

  Fly   391 QFRENQRKLAEQMLEAERI-EQSKTKPMVKQ-----------WSR 423
            .|:..|.:||.:  |.:|| |.::.|   ||           |||
Zfish   345 AFKRRQAQLARE--EEQRISEMAQQK---KQGFSLGTIAGRFWSR 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_001303557.1 CPDc 227..355 CDD:214729 69/127 (54%)
timm50NP_956959.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 61..93 5/31 (16%)
NIF 183..330 CDD:281081 80/146 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589340
Domainoid 1 1.000 183 1.000 Domainoid score I3366
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H57031
Inparanoid 1 1.050 275 1.000 Inparanoid score I2930
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1142452at2759
OrthoFinder 1 1.000 - - FOG0003614
OrthoInspector 1 1.000 - - otm26612
orthoMCL 1 0.900 - - OOG6_102279
Panther 1 1.100 - - LDO PTHR12210
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1522
SonicParanoid 1 1.000 - - X2489
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.790

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