DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and ttm2

DIOPT Version :9

Sequence 1:NP_001303557.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster


Alignment Length:322 Identity:204/322 - (63%)
Similarity:257/322 - (79%) Gaps:3/322 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 LLAKLFPQTSPEVDSNAEQERKKREEEEE-KENERAWKRMKLGFAIFGGSAVAAGFWAVYEFGKP 170
            :|.|||||||.|.:....:||:|.||||| ||.|||::||||||.:||..::...|||:|.:|:|
  Fly    87 ILTKLFPQTSEESNDEESRERRKLEEEEEQKELERAFRRMKLGFGLFGIGSMLFSFWAIYFYGRP 151

  Fly   171 EVDPNGQPIEDEFTHKPLVQQYLQRMWKSIHYYQRMIQEPSRAKLLPDPLKPPYVQPRYTLVLEM 235
            .:|.:|..:.|||:..|.:||.:.|.|||::.:||..:||||.|||||||:||||||.||||||:
  Fly   152 SLDEHGNEVIDEFSCLPQMQQLMWRTWKSVNRFQRFFKEPSRKKLLPDPLQPPYVQPPYTLVLEI 216

  Fly   236 KDVLVHPDWTYQTGWRFKKRPGVDHFLAECAKDFEIVVFTAEQGMTVFPILDALDPNGYIMYRLV 300
            |||||||||||:||||||||||||.||.||||.|||||:|||||:||||::|||||||.||||||
  Fly   217 KDVLVHPDWTYETGWRFKKRPGVDVFLKECAKYFEIVVYTAEQGVTVFPLVDALDPNGCIMYRLV 281

  Fly   301 RDATHFVDGHHVKNLDNLNRDLKKVIVVDWDANATKMHPDNTFGLARWHGNDDDGQLLDLIAFLK 365
            ||:|||..|||||||||||||||:|:|||||.|:||.||.|:|.:.||.|||:|..|.:|.:||.
  Fly   282 RDSTHFDGGHHVKNLDNLNRDLKRVVVVDWDRNSTKFHPSNSFSIPRWSGNDNDTTLFELTSFLS 346

  Fly   366 IIAQNNVDDVREVLHYYRQFDDPINQFRENQRKLAEQMLEAERIEQ-SKTKPMVKQWSRNIL 426
            ::..:.:|||||||.||.||.|.::|||||||||.| ::.||.:|: ||::|:||.|:|..:
  Fly   347 VLGTSEIDDVREVLQYYNQFSDSLSQFRENQRKLGE-LMHAEEVEKTSKSRPVVKNWTRGFI 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_001303557.1 CPDc 227..355 CDD:214729 101/127 (80%)
ttm2NP_612023.1 CPDc 208..336 CDD:214729 101/127 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45459142
Domainoid 1 1.000 132 1.000 Domainoid score I1664
eggNOG 1 0.900 - - E1_COG5190
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 141 1.000 Inparanoid score I1782
Isobase 1 0.950 - 0.917438 Normalized mean entropy S1903
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1142452at2759
OrthoFinder 1 1.000 - - FOG0003614
OrthoInspector 1 1.000 - - otm26612
orthoMCL 1 0.900 - - OOG6_102279
Panther 1 1.100 - - P PTHR12210
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1522
SonicParanoid 1 1.000 - - X2489
1312.780

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