DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and Ctdspl2

DIOPT Version :9

Sequence 1:NP_001303557.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_997615.1 Gene:Ctdspl2 / 329506 MGIID:1196405 Length:465 Species:Mus musculus


Alignment Length:395 Identity:89/395 - (22%)
Similarity:153/395 - (38%) Gaps:66/395 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 STPRL-------LTHIHQHRALGNHYHHYHQHYQHQHHLLHHQQQYLRLFTCTALPAAAPALFSI 75
            ||||.       |:.:.:...:......|....||     ..|...|....|:..|.....|.:|
Mouse    85 STPRTGEKPDKQLSRVRRKSPVNGEAGSYEMTNQH-----IKQNGKLEDNPCSGSPPRTTLLGTI 144

  Fly    76 LHTARGYSSTTKQEAGATGPNDAPEVAPNAPLLAKLFPQTSPEVDSNAEQERKKREEEEEKENER 140
            ......:.|...:. |.:| :|:|..|                    .|.|...::.:.|:.:|.
Mouse   145 FSPVFNFFSPANKN-GTSG-SDSPGQA--------------------VEAEEIVKQLDMEQVDEI 187

  Fly   141 AWKRMKLGFAIFGGSAVAA------GFWAVYEFGKPEVDPNGQPIEDEFTHKPL-VQQYLQRMWK 198
            .........|.:...||..      |.....|....::.|...|:..|..:... .:...:..|:
Mouse   188 TTSTTSANGAAYSNQAVQVRPSLNNGLEEAEETVTRDIPPLTAPVTPESGYSSAHAEATYEEDWE 252

  Fly   199 SI--HYYQRMIQEPSRAKLLPDPLKPPYVQ--PRYTLVLEMKDVLVH-----------------P 242
            ..  :|:.:.:...:..:|...|..|...:  |.::|||::.:.|||                 .
Mouse   253 VFDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQ 317

  Fly   243 DWTYQTGWRFKKRPGVDHFLAECAKDFEIVVFTAEQGMTVFPILDALDPNGYIM-YRLVRDATHF 306
            |..||...|.  ||....||...::.:||::|||.:.:....:|:.|||...:: :||.|:....
Mouse   318 DVIYQVYVRL--RPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVC 380

  Fly   307 VDGHHVKNLDNLNRDLKKVIVVDWDANATKMHPDNTFGLARWHGNDDDGQLLDLIAFLKIIAQNN 371
            |.|:::|:|:.|.|||.|.|::|....|......|...:..|..:.:|.:||.||.||:.:.:.|
Mouse   381 VQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLKLIPFLEKLVELN 445

  Fly   372 VDDVR 376
             :|||
Mouse   446 -EDVR 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_001303557.1 CPDc 227..355 CDD:214729 41/145 (28%)
Ctdspl2NP_997615.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..133 11/52 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..239 4/20 (20%)
HIF-SF_euk 286..447 CDD:274055 48/163 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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