DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and ctdspl2b

DIOPT Version :10

Sequence 1:NP_570027.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:XP_073762281.1 Gene:ctdspl2b / 323089 ZFINID:ZDB-GENE-030131-1809 Length:490 Species:Danio rerio


Alignment Length:360 Identity:91/360 - (25%)
Similarity:142/360 - (39%) Gaps:96/360 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 QQYLRLFTCTAL---PAAAPALFSILHTA---RGYSSTTKQEAGATGPNDAPEVAPNAPLLAKLF 112
            :|...:.||||.   |.:.|...|.:.:|   ...:.|.:||:..|...|.|      ||.|...
Zfish   195 EQVEEMPTCTATSREPLSVPLYTSAMTSAFRPPPTAHTPEQESENTPHPDLP------PLTAPGS 253

  Fly   113 PQTSPEVDSNAEQERKKREEEEEKENERAWKRMKLGFAIFGGSAVAAGFWAVYE--FGKPEVDPN 175
            |.|...||::.....:...|||                           |.|::  |....|.| 
Zfish   254 PATGGYVDASITVPAEGSYEEE---------------------------WEVFDPYFFIKHVPP- 290

  Fly   176 GQPIEDEFTHKPLVQQYLQRMWKSIHYYQRMIQEPSRAKLLPDPLKPPYVQPRYTLVLEMKDVLV 240
              ..|::.|.||.:                             |||.... |.::|||::.:.||
Zfish   291 --LTEEQLTRKPAL-----------------------------PLKTRST-PEFSLVLDLDETLV 323

  Fly   241 H-----------------PDWTYQTGWRFKKRPGVDHFLAECAKDFEIVVFTAEQGMTVFPILDA 288
            |                 .|..||...|.  ||....||...::.:||::|||.:.:....:|:.
Zfish   324 HCSLNELDDAALTFPVLFQDVIYQVYVRL--RPFFREFLERMSQIYEIILFTASKKVYADKLLNI 386

  Fly   289 LDPNGYIM-YRLVRDATHFVDGHHVKNLDNLNRDLKKVIVVDWDANATKMHPDNTFGLARWHGND 352
            |||...:: :||.|:....|.|:::|:|:.|.|||.|.|::|....|......|...:..|..:.
Zfish   387 LDPRKQLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDR 451

  Fly   353 DDGQLLDLIAFLKIIAQNNVDDVR-EVLHYYRQFD 386
            :|.:||.|:.||:.:.:.| :||| .|...:|..|
Zfish   452 NDSELLKLVPFLEKLVELN-EDVRPHVRERFRLHD 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_570027.1 CPDc 227..355 CDD:214729 41/145 (28%)
ctdspl2bXP_073762281.1 None

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