DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and ctdsp2

DIOPT Version :10

Sequence 1:NP_570027.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_955838.1 Gene:ctdsp2 / 321465 ZFINID:ZDB-GENE-030131-184 Length:258 Species:Danio rerio


Alignment Length:191 Identity:56/191 - (29%)
Similarity:88/191 - (46%) Gaps:24/191 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 AKLLPDPLKP---PYVQPRYTLVLEMKDVLVHPDW-----------------TYQTGWRFKKRPG 257
            ||:..:.|.|   .:.|.:..:|:::.:.|||..:                 |:|.  ...|||.
Zfish    70 AKIPGESLLPAVTSHDQGKICVVIDLDETLVHSSFKPISNADFIVPVEIEGTTHQV--YVLKRPY 132

  Fly   258 VDHFLAECAKDFEIVVFTAEQGMTVFPILDALDPNGYIMYRLVRDATHFVDGHHVKNLDNLNRDL 322
            ||.||....:.||.|:|||.......|:.|.||..|....||.|::..|..|.:||:|..|.|:|
Zfish   133 VDEFLQRMGELFECVLFTASLAKYADPVTDLLDQCGVFRTRLFRESCVFYQGCYVKDLSRLGREL 197

  Fly   323 KKVIVVDWDANATKMHPDNTFGLARWHGNDDDGQLLDLIAFLKIIAQNNVDDVREVLHYYR 383
            .|.:::|....:...||:|...:..|..:.:|.:||.||...:.::|  .:||...|...|
Zfish   198 HKTLILDNSPASYIFHPENAVPVLSWFDDSEDTELLHLIPVFEELSQ--AEDVYSRLQQLR 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_570027.1 CPDc 227..355 CDD:214729 41/144 (28%)
ctdsp2NP_955838.1 HIF-SF_euk 88..247 CDD:274055 47/162 (29%)

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