DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and ctdsp2

DIOPT Version :9

Sequence 1:NP_001303557.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_955838.1 Gene:ctdsp2 / 321465 ZFINID:ZDB-GENE-030131-184 Length:258 Species:Danio rerio


Alignment Length:191 Identity:56/191 - (29%)
Similarity:88/191 - (46%) Gaps:24/191 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 AKLLPDPLKP---PYVQPRYTLVLEMKDVLVHPDW-----------------TYQTGWRFKKRPG 257
            ||:..:.|.|   .:.|.:..:|:::.:.|||..:                 |:|.  ...|||.
Zfish    70 AKIPGESLLPAVTSHDQGKICVVIDLDETLVHSSFKPISNADFIVPVEIEGTTHQV--YVLKRPY 132

  Fly   258 VDHFLAECAKDFEIVVFTAEQGMTVFPILDALDPNGYIMYRLVRDATHFVDGHHVKNLDNLNRDL 322
            ||.||....:.||.|:|||.......|:.|.||..|....||.|::..|..|.:||:|..|.|:|
Zfish   133 VDEFLQRMGELFECVLFTASLAKYADPVTDLLDQCGVFRTRLFRESCVFYQGCYVKDLSRLGREL 197

  Fly   323 KKVIVVDWDANATKMHPDNTFGLARWHGNDDDGQLLDLIAFLKIIAQNNVDDVREVLHYYR 383
            .|.:::|....:...||:|...:..|..:.:|.:||.||...:.::|  .:||...|...|
Zfish   198 HKTLILDNSPASYIFHPENAVPVLSWFDDSEDTELLHLIPVFEELSQ--AEDVYSRLQQLR 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_001303557.1 CPDc 227..355 CDD:214729 41/144 (28%)
ctdsp2NP_955838.1 FCP1 <64..253 CDD:227517 54/186 (29%)
HIF-SF_euk 88..247 CDD:274055 47/162 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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