DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and scpl-4

DIOPT Version :9

Sequence 1:NP_001303557.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_505722.1 Gene:scpl-4 / 179481 WormBaseID:WBGene00011897 Length:452 Species:Caenorhabditis elegans


Alignment Length:376 Identity:137/376 - (36%)
Similarity:212/376 - (56%) Gaps:51/376 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 PAAAPALFSI---------LHTARGYSSTTKQEAGATGPNDAPEVAPNAPLLAKLFPQTSPEVDS 121
            ||.||...:|         |......:|.:...:|.:..|..|                     .
 Worm   107 PAPAPTSSAIDELNSLKDSLEKLESAASKSSSSSGGSSDNSDP---------------------G 150

  Fly   122 NAE--QERKKREEEEEKENERAWKRMKLG-FAIFGGSAVAAGFWA-VYEFGKPEVDPNGQPIEDE 182
            |||  :.|:||.|          :..::| :.:||||.:  ||.: .:.:|:.:.|..|..|.||
 Worm   151 NAEEIEARRKRME----------RNTRIGAYVLFGGSII--GFISFCFYYGRAQRDEFGNVISDE 203

  Fly   183 FTHKPLVQQYLQRMWKSIHYYQRMIQEPSRAKLLPDPLKPPYVQPRYTLVLEMKDVLVHPDWTYQ 247
            |:...|...|  |:..|...::..:.||:|.:||||||..||:||:||:|:|:|::||||:|||:
 Worm   204 FSGSFLAPFY--RIANSFKLWRDYVVEPAREQLLPDPLPAPYLQPKYTIVIELKNILVHPEWTYK 266

  Fly   248 TGWRFKKRPGVDHFLAECA-KDFEIVVFTAEQGMTVFPILDALDPNGYIMYRLVRDATHFVDGHH 311
            ||:||.|||.:|:||.... .:||:|::::|..||..|::|:.||...|||:|.||.|.:::|||
 Worm   267 TGYRFLKRPALDYFLDVIGYPNFEVVIYSSESMMTAAPVVDSFDPKQRIMYKLFRDCTKYMNGHH 331

  Fly   312 VKNLDNLNRDLKKVIVVDWDANATKMHPDNTFGLARWHGNDDDGQLLDLIAFLKIIAQNNVDDVR 376
            ||:|..|||||.|||.:|:||.:.:::|:|...:..|.||.||..|:||...||.|..::.:|||
 Worm   332 VKDLSKLNRDLSKVIYIDFDAKSGQLNPENMLRVPEWKGNMDDTSLVDLAELLKTIHLSDAEDVR 396

  Fly   377 EVLHYYRQFDDPINQFRENQRKLAEQMLEAERIEQSKTKPMVKQWSRNILG 427
            .:|.||.|:|||..:||.....|::|  |.::.:|.....|:|::|..:.|
 Worm   397 PMLQYYSQYDDPAKEFRRRAVYLSQQ--EEQKKQQPDDSSMLKRYSGRLFG 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_001303557.1 CPDc 227..355 CDD:214729 63/128 (49%)
scpl-4NP_505722.1 NIF 248..396 CDD:281081 70/147 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163382
Domainoid 1 1.000 161 1.000 Domainoid score I2440
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 245 1.000 Inparanoid score I2048
Isobase 1 0.950 - 0.917438 Normalized mean entropy S1903
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003614
OrthoInspector 1 1.000 - - otm14786
orthoMCL 1 0.900 - - OOG6_102279
Panther 1 1.100 - - LDO PTHR12210
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1522
SonicParanoid 1 1.000 - - X2489
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.730

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