DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and fcp-1

DIOPT Version :9

Sequence 1:NP_001303557.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_492423.2 Gene:fcp-1 / 172719 WormBaseID:WBGene00009479 Length:659 Species:Caenorhabditis elegans


Alignment Length:295 Identity:61/295 - (20%)
Similarity:104/295 - (35%) Gaps:96/295 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 FWAVYEFGKPEVDPNGQP--IEDEFTHKPLVQQYLQRMWKSIH--YYQRMIQEPSRAKLLPDPLK 221
            |..|.:...|:......|  |||: .|:..|.:.::|:..:||  ||::.....|.         
 Worm   284 FKEVGDINAPKNSKEQMPVQIEDD-AHEDKVLEEIERVLTNIHDKYYEKHDLRGSE--------- 338

  Fly   222 PPYVQPRYTLVLEMKDVLVHPDWTYQTGWRFKKRPGVDHFLAECAKDFEIVVFTAEQGMTVFPIL 286
                    .::|::|:|:...        |.|...|       |     ::||:.     :.|:.
 Worm   339 --------EVLLDVKEVIKEE--------RHKVLDG-------C-----VIVFSG-----IVPMG 370

  Fly   287 DALDPNGYIMYRL------------VRDATHFVDGHH-VKNLDNLNRDLKKVIVVDW-------- 330
            :.|:...  :|||            ..|.||.|...: .:.:...||..|.|:.|.|        
 Worm   371 EKLERTD--IYRLCTQFGAVIVPDVTDDVTHVVGARYGTQKVYQANRLNKFVVTVQWVYACVEKW 433

  Fly   331 ---DANATKMHPDNTFGLARWHGND--DDGQLLDLIAFLKIIAQNNVDDVREVLHYYRQFDDPIN 390
               |.|..::..::|..:.|..|:.  :|...:|.|....:...||  :|.|.|.  ...||..|
 Worm   434 LKADENLFQLTKESTPPVGRPLGSKYVNDLANMDTIGKAALADMNN--EVDEALS--DDEDDGDN 494

  Fly   391 Q-----------------FRENQRKLAEQMLEAER 408
            :                 ..|.|.|..|:|.:.|:
 Worm   495 EDEDDDGNDVGEDKGDENLEEKQEKNEEEMDDVEQ 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_001303557.1 CPDc 227..355 CDD:214729 29/153 (19%)
fcp-1NP_492423.2 HAD_like 138..284 CDD:328728 61/295 (21%)
BRCT 358..431 CDD:237994 19/91 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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