DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm50 and timm50

DIOPT Version :9

Sequence 1:NP_001303557.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001120038.1 Gene:timm50 / 100145004 XenbaseID:XB-GENE-963112 Length:368 Species:Xenopus tropicalis


Alignment Length:354 Identity:150/354 - (42%)
Similarity:202/354 - (57%) Gaps:25/354 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 RGYSSTTKQEAGATGPNDAPEVAPNAPLLAKL-FPQTSPEVDSNAEQERKKREEEEEKENERAWK 143
            |.:||....|.|.||          |.|..|| ..:.....||:..:|::|:    :|||....|
 Frog    28 RAFSSEQGAEGGLTG----------AVLQEKLQRRENEASSDSSGSEEKQKK----QKENAANAK 78

  Fly   144 RMKLGFAIFGGSAVAAGFWAVYEFGKPEVDPNGQPIEDEFTHKPLVQQYLQRMWKSIHYYQRMIQ 208
            |..|..|  |...||.....||.||...||..|..|.|||...|.|.|.::|.:|....|::||.
 Frog    79 RFLLRAA--GLLGVAGSGSLVYIFGSNSVDEQGNKIPDEFDSDPPVVQQIRRTYKYFIDYRQMII 141

  Fly   209 EPSRAKLLPDPLKPPYVQPRYTLVLEMKDVLVHPDWTYQTGWRFKKRPGVDHFLAECAKDFEIVV 273
            ||:..||||||||.||.||.||||||:.|||:||:|:..||||||||.|:|:...:.|..:|||:
 Frog   142 EPTSPKLLPDPLKEPYYQPPYTLVLELTDVLLHPEWSLSTGWRFKKRAGIDNLFQQLAPLYEIVI 206

  Fly   274 FTAEQGMTVFPILDALDPNGYIMYRLVRDATHFVDGHHVKNLDNLNRDLKKVIVVDWDANATKMH 338
            ||:|.|:|.||::|.:||:|::.|||.||||.:.||||||::..||||...|::||....|.|:.
 Frog   207 FTSETGLTAFPLIDNVDPHGFVSYRLFRDATRYTDGHHVKDISCLNRDPSHVVIVDCKREAFKLQ 271

  Fly   339 PDNTFGLARWHGNDDDGQLLDLIAFLKIIAQNNVDDVREVLHYYRQFDDPINQFRENQRKL--AE 401
            |.|...:.:|.|:.:|..|.||.||||.||.:.|.|||.||..|...:||:..|:..|.:|  .|
 Frog   272 PYNGLAIKKWDGSSEDRALYDLTAFLKTIAVSGVSDVRSVLENYALEEDPLEAFKRRQTQLEQEE 336

  Fly   402 QMLEAERIEQSKTKPMV------KQWSRN 424
            |...|:..:.||.:.:.      :.|.|:
 Frog   337 QQRLADMSQLSKRQTLSLGSFTGRLWPRS 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm50NP_001303557.1 CPDc 227..355 CDD:214729 64/127 (50%)
timm50NP_001120038.1 LPLAT <64..>128 CDD:388412 26/69 (38%)
HAD_FCP1-like 161..278 CDD:319823 61/116 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 173 1.000 Domainoid score I3648
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H57031
Inparanoid 1 1.050 260 1.000 Inparanoid score I3026
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1142452at2759
OrthoFinder 1 1.000 - - FOG0003614
OrthoInspector 1 1.000 - - otm48079
Panther 1 1.100 - - LDO PTHR12210
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1522
SonicParanoid 1 1.000 - - X2489
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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