DRSC/TRiP Functional Genomics Resources

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Protein Alignment dwg and TFIIIA

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_001322779.1 Gene:TFIIIA / 843536 AraportID:AT1G72050 Length:427 Species:Arabidopsis thaliana


Alignment Length:381 Identity:87/381 - (22%)
Similarity:142/381 - (37%) Gaps:108/381 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 EHLLPEAEDVCEDEDFLEES-LDSAPPTAGEALPYVCTVCQKAFRQQCRLNQHMRSHVDEKQYEC 335
            |.:.| :..|....|..||: :|.......:...|:|..|..:..:...:.:|::||   .|.|.
plant     2 EEINP-SSSVDNKRDMAEEAKVDVKTSAKKDIRNYLCQYCGISRSKNYLITKHIQSH---HQMEL 62

  Fly   336 EECGKRLKHLRNYKEHMLTHTNVKPHQCSICGRFYRTTSSLAVHKRTHAEKKPYNC--DQCGRGY 398
            ||       .|:.:...:...:...|.|..||..::..:.|..|.::|:.::.:.|  |.|...|
plant    63 EE-------ERDDEACEVDEESSSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASY 120

  Fly   399 AAFDHLRRHKLTHTGERPYAC--DLCDKAYYDSSSLRQH-KISHT-------------GKKAFTC 447
            ...|||.||.|||.| :.:.|  :.|...:....::.:| |..|:             |.|..||
plant   121 RRKDHLNRHLLTHKG-KLFKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDKDNTGLGDGDKDNTC 184

  Fly   448 ------EICGVGLSQK--------------SGYKKHMMVHSGVKAHKCDV--CGHAFTFTSNL-- 488
                  |..|.|..:|              :|..:.....:|.|...|..  ||.||.:.|.|  
plant   185 KGDDDKEKSGSGGCEKENEGNGGSGKDNNGNGDSQPAECSTGQKQVVCKEIGCGKAFKYPSQLQK 249

  Fly   489 --NAHVRLHSGE---------KPFKCEVCVKAF----------------PTKKRLASHMRVHNKE 526
              ::||:|.|.|         |.|..|.|:|:.                ..||.:..|:|.|:::
plant   250 HQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINCEICGSKHLKKNIKRHLRTHDED 314

  Fly   527 SPVTATVAVQSINPPSRQAGAEGATGGGATGGSPTGGGATGGSATNL--HITEVHE 580
            |           :|...:...||.:             :|...|:||  |:..||:
plant   315 S-----------SPGEIKCEVEGCS-------------STFSKASNLQKHMKAVHD 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871
COG5048 <297..451 CDD:227381 41/177 (23%)
C2H2 Zn finger 307..327 CDD:275368 3/19 (16%)
C2H2 Zn finger 335..355 CDD:275368 3/19 (16%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
COG5048 <387..523 CDD:227381 50/204 (25%)
C2H2 Zn finger 391..411 CDD:275368 10/21 (48%)
zf-H2C2_2 403..426 CDD:290200 10/24 (42%)
C2H2 Zn finger 419..439 CDD:275368 4/22 (18%)
C2H2 Zn finger 447..467 CDD:275368 6/39 (15%)
C2H2 Zn finger 475..495 CDD:275368 9/25 (36%)
zf-H2C2_2 487..510 CDD:290200 11/35 (31%)
C2H2 Zn finger 503..523 CDD:275368 7/35 (20%)
TFIIIANP_001322779.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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