DRSC/TRiP Functional Genomics Resources

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Protein Alignment dwg and SGR5

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_001077868.1 Gene:SGR5 / 814725 AraportID:AT2G01940 Length:446 Species:Arabidopsis thaliana


Alignment Length:195 Identity:51/195 - (26%)
Similarity:79/195 - (40%) Gaps:36/195 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 CSICGRFYRTTSSLAVHKRTHAEKKPYNCDQCGRGYAAFDHLRRHKLTHTGERPYAC-------- 419
            |.||.:.::...:|.:|:|.|  |.|:..            |:|.......:|.|.|        
plant    75 CEICNQGFQRDQNLQMHRRRH--KVPWKL------------LKRDNNIEVKKRVYVCPEPTCLHH 125

  Fly   420 DLCDKAYYDSSSLRQH-KISHTGKKAFTCEICGVGLSQKSGYKKHMMVHSGVKAHKCDVCGHAFT 483
            :.| .|..|...:::| :..|:..|.:.||.|..|.:.:|.||.|:.. .|.:.|.|| ||...:
plant   126 NPC-HALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGFFSS 187

  Fly   484 F--------TSNLNAHVRLHSGEKPFKCEVCVKAFPTKKRLASHMRVHNKESPVTATVAVQSINP 540
            |        ..|.:|. |:|. |.|...:..|.......|.||.:...:.|:....||||.:..|
plant   188 FRVESFIEHQDNCSAR-RVHR-EPPRPPQTAVTVPACSSRTASTVSTPSSETNYGGTVAVTTPQP 250

  Fly   541  540
            plant   251  250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871
COG5048 <297..451 CDD:227381 22/96 (23%)
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
COG5048 <387..523 CDD:227381 37/152 (24%)
C2H2 Zn finger 391..411 CDD:275368 2/19 (11%)
zf-H2C2_2 403..426 CDD:290200 6/30 (20%)
C2H2 Zn finger 419..439 CDD:275368 5/28 (18%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 8/27 (30%)
zf-H2C2_2 487..510 CDD:290200 7/22 (32%)
C2H2 Zn finger 503..523 CDD:275368 4/19 (21%)
SGR5NP_001077868.1 C2H2 Zn finger 75..95 CDD:275368 6/19 (32%)
C2H2 Zn finger 117..145 CDD:275368 5/28 (18%)
C2H2 Zn finger 153..172 CDD:275368 8/18 (44%)
ATP-synt_B <332..422 CDD:304375
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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