DRSC/TRiP Functional Genomics Resources

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Protein Alignment dwg and RGD1561277

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:XP_006246593.2 Gene:RGD1561277 / 691468 RGDID:1561277 Length:910 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871
COG5048 <297..451 CDD:227381
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368
C2H2 Zn finger 363..383 CDD:275368
COG5048 <387..523 CDD:227381
C2H2 Zn finger 391..411 CDD:275368
zf-H2C2_2 403..426 CDD:290200
C2H2 Zn finger 419..439 CDD:275368
C2H2 Zn finger 447..467 CDD:275368
C2H2 Zn finger 475..495 CDD:275368
zf-H2C2_2 487..510 CDD:290200
C2H2 Zn finger 503..523 CDD:275368
RGD1561277XP_006246593.2 KRAB 123..182 CDD:214630
C2H2 Zn finger 364..384 CDD:275370
C2H2 Zn finger 496..539 CDD:275368
zf-C2H2 545..567 CDD:395048
C2H2 Zn finger 547..567 CDD:275368
COG5048 571..910 CDD:227381
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 603..623 CDD:275368
C2H2 Zn finger 631..651 CDD:275368
C2H2 Zn finger 659..679 CDD:275368
C2H2 Zn finger 687..707 CDD:275368
C2H2 Zn finger 715..735 CDD:275368
C2H2 Zn finger 743..763 CDD:275368
C2H2 Zn finger 771..791 CDD:275368
C2H2 Zn finger 799..819 CDD:275368
C2H2 Zn finger 827..847 CDD:275368
C2H2 Zn finger 855..875 CDD:275368
C2H2 Zn finger 883..903 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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