DRSC/TRiP Functional Genomics Resources

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Protein Alignment dwg and Gtf3a

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_079928.2 Gene:Gtf3a / 66596 MGIID:1913846 Length:364 Species:Mus musculus


Alignment Length:279 Identity:79/279 - (28%)
Similarity:125/279 - (44%) Gaps:51/279 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 APPTAGEALP--YVCTV--CQKAFRQQCRLNQHMRSHVDEKQYEC--EECGKRLKHLRNY--KEH 351
            |||.  .|||  ::|:.  |..::.:..:|:.|:..|..|:.:.|  |.|||..  :|:|  ..|
Mouse    28 APPR--PALPSRFICSFPDCSASYNKAWKLDAHLCKHTGERPFVCDYEGCGKAF--IRDYHLSRH 88

  Fly   352 MLTHTNVKPHQCSI--CGRFYRTTSSLAVH-KRTHAE-KKPYNC--DQCGRGYAAFDHLRRHKLT 410
            :|.||..||..|:.  |.:.:.|.|:|..| :|.|.. :|.|.|  :.|.:.:.....||.|:..
Mouse    89 VLIHTGEKPFVCADDGCNQKFNTKSNLKKHIERKHGNPQKQYVCSYEGCKKAFKKHQQLRTHQCQ 153

  Fly   411 HTGERPYAC--DLCDKAYYDSSSLRQHKISHTG-------------------------KKAFTCE 448
            ||.|..:.|  :.|.|.:...|.|::|...|.|                         |:..||.
Mouse   154 HTSEPLFRCTHEGCGKHFASPSRLKRHGKVHEGYLCQKGCSFMGKTWTELLKHMREAHKEDITCN 218

  Fly   449 ICGVGLSQKSGYKKHMMVHSGVK-AHKC--DVCGHAFTFTSNLNAHV-RLHSGEKPFKCE--VCV 507
            :|.....::...|:||..|:..: .::|  ..||..:|...||.:|: ..|..::||.||  .|.
Mouse   219 VCQRMFKRRDYLKQHMKTHAPERDVYRCPRQGCGRTYTTVFNLQSHILSFHEEKRPFVCEHAGCG 283

  Fly   508 KAFPTKKRLASHMRVHNKE 526
            |.|..|:.|..|..||:.:
Mouse   284 KTFAMKQSLMRHSVVHDPD 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871
COG5048 <297..451 CDD:227381 52/194 (27%)
C2H2 Zn finger 307..327 CDD:275368 4/21 (19%)
C2H2 Zn finger 335..355 CDD:275368 9/23 (39%)
C2H2 Zn finger 363..383 CDD:275368 7/22 (32%)
COG5048 <387..523 CDD:227381 44/170 (26%)
C2H2 Zn finger 391..411 CDD:275368 5/21 (24%)
zf-H2C2_2 403..426 CDD:290200 9/24 (38%)
C2H2 Zn finger 419..439 CDD:275368 6/21 (29%)
C2H2 Zn finger 447..467 CDD:275368 5/19 (26%)
C2H2 Zn finger 475..495 CDD:275368 7/22 (32%)
zf-H2C2_2 487..510 CDD:290200 10/25 (40%)
C2H2 Zn finger 503..523 CDD:275368 8/21 (38%)
Gtf3aNP_079928.2 zinc finger 40..62 4/21 (19%)
C2H2 Zn finger 43..62 CDD:275368 3/18 (17%)
COG5048 <62..185 CDD:227381 39/124 (31%)
zinc finger 70..92 9/23 (39%)
C2H2 Zn finger 70..92 CDD:275368 9/23 (39%)
zinc finger 100..123 7/22 (32%)
C2H2 Zn finger 100..123 CDD:275368 7/22 (32%)
zinc finger 132..154 5/21 (24%)
C2H2 Zn finger 135..154 CDD:275368 4/18 (22%)
zinc finger 162..184 6/21 (29%)
C2H2 Zn finger 162..184 CDD:275368 6/21 (29%)
zinc finger 189..211 0/21 (0%)
zinc finger 217..237 5/19 (26%)
C2H2 Zn finger 217..237 CDD:275368 5/19 (26%)
zinc finger 246..269 7/22 (32%)
C2H2 Zn finger 246..269 CDD:275368 7/22 (32%)
zinc finger 277..299 8/21 (38%)
C2H2 Zn finger 277..299 CDD:275368 8/21 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839975
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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