DRSC/TRiP Functional Genomics Resources

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Protein Alignment dwg and CG6808

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_001247055.1 Gene:CG6808 / 41394 FlyBaseID:FBgn0037921 Length:375 Species:Drosophila melanogaster


Alignment Length:509 Identity:122/509 - (23%)
Similarity:181/509 - (35%) Gaps:164/509 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 CRTCTRACKLHKPLQEEIDLGSEGSTTLASMLNYCTGLSFEPQDGAAMPQHICLHCLQLLEQAFN 78
            ||||.:     |..|..:....| |.....:::| .|.|.:|.||  :|..||..||..||:...
  Fly    10 CRTCRK-----KGTQSTLQSLFE-SNAHKLLISY-AGTSVKPDDG--LPDQICTVCLMQLEEVDR 65

  Fly    79 FKRMVIDSDELLRLGLDEARCSSFHESQTHSPNQSQQHDQQQQAFDSTEEYVMIEMLNEEQENVA 143
            |                   .|:..:|..|..:..:|......||::.|:...:|  .:::....
  Fly    66 F-------------------LSACKQSDAHLRSLVRQTLSSASAFETLEDKDQLE--QKKRARKQ 109

  Fly   144 NLDEELAEEDRRIFAMTVDEEEEFLTEEVDQDDELSEEEHQLAQSGDQQEEHITMESVHEFQPAE 208
            |:...|.||:    .:....:|..|  |..:|||:.                    .:::|..  
  Fly   110 NISGRLIEEN----PINFKTQENAL--ETTKDDEIL--------------------PINKFSS-- 146

  Fly   209 VEYVTIKNEFETIVTEEDEFEV-MNDSGAHDAILDCQMIVIPAEGAIDEVIGEETLELEGDGREE 272
             ::|     |:..|..|:|.:: ..|....|..||.:         |.:....||...|.....:
  Fly   147 -DFV-----FDLNVNAENEKDIHQEDYTISDMDLDRE---------ISDQNYSETYSQESSAATD 196

  Fly   273 HLLPEAEDVCEDEDFLEESLDSAPP--TAGEALPYVCTVCQKAFRQQCRLNQHMRSHVDEKQYEC 335
            .:    ::..||...||.|.|....  .|.|...|.|.:|...:|...:||.|.:.|..||.::|
  Fly   197 SI----QETSEDYHNLEPSADYVIDLGVACEPDKYRCKICSNTYRCLSQLNAHSQVHRKEKDHQC 257

  Fly   336 EECGKRLKHLRNYKEHMLTHTNVKPHQCSICGRFYRTTSSLAVHKRTHAEKKPYNCDQCGRGYAA 400
            |.|.|..:...|.|.||.|||..||:||..|.|.:...|       ||                 
  Fly   258 EVCQKTFRAACNLKTHMRTHTGEKPYQCCYCSRRFADNS-------TH----------------- 298

  Fly   401 FDHLRRHKLTHTGERPYACDLCDKAYYDSSSLRQHKISHTGKKAFTCEICGVGLSQKSGYKKHMM 465
                |:|:..||.|||||                                               
  Fly   299 ----RKHERLHTNERPYA----------------------------------------------- 312

  Fly   466 VHSGVKAHKCDVCGHAFTFTSNLNAHVRLHSGEKPFKCEVCVKAFPTKKRLASH 519
                     |::||..|:.:|:.|||..|||.||..||.:|.|.|..|.:|.:|
  Fly   313 ---------CNICGKTFSLSSSRNAHYYLHSSEKSHKCLMCKKEFRLKHQLTAH 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871 22/76 (29%)
COG5048 <297..451 CDD:227381 41/155 (26%)
C2H2 Zn finger 307..327 CDD:275368 6/19 (32%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 4/19 (21%)
COG5048 <387..523 CDD:227381 30/133 (23%)
C2H2 Zn finger 391..411 CDD:275368 2/19 (11%)
zf-H2C2_2 403..426 CDD:290200 9/22 (41%)
C2H2 Zn finger 419..439 CDD:275368 0/19 (0%)
C2H2 Zn finger 447..467 CDD:275368 0/19 (0%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
zf-H2C2_2 487..510 CDD:290200 12/22 (55%)
C2H2 Zn finger 503..523 CDD:275368 7/17 (41%)
CG6808NP_001247055.1 zf-AD 9..79 CDD:214871 25/96 (26%)
C2H2 Zn finger 229..249 CDD:275368 6/19 (32%)
zf-C2H2 255..277 CDD:278523 8/21 (38%)
C2H2 Zn finger 257..277 CDD:275368 8/19 (42%)
zf-H2C2_2 269..293 CDD:290200 13/23 (57%)
C2H2 Zn finger 285..305 CDD:275368 8/47 (17%)
zf-H2C2_2 299..321 CDD:290200 12/77 (16%)
C2H2 Zn finger 313..333 CDD:275368 8/19 (42%)
C2H2 Zn finger 341..359 CDD:275368 7/17 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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