DRSC/TRiP Functional Genomics Resources

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Protein Alignment dwg and CG1233

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_612034.1 Gene:CG1233 / 38063 FlyBaseID:FBgn0035137 Length:1129 Species:Drosophila melanogaster


Alignment Length:272 Identity:65/272 - (23%)
Similarity:106/272 - (38%) Gaps:31/272 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 PYVCTVCQKA-FRQQCRLNQHM-RSH-VDEKQYECEECG-KRLKHLRNYKEHMLTHTNVKPHQCS 364
            |.||..|:.: |.....|:.|: |:| :|.:.|.|:.|. |...:.|....|...|:..:.::|.
  Fly   827 PVVCPECKSSNFSNWNCLHTHLWRTHQIDMELYSCQLCSFKTPIYSRLVNTHAKIHSEERNYKCE 891

  Fly   365 ICGRFYRTTSSLAVHKRTH------------------AEKKP---YNCDQCGRGYAAFDHLRRHK 408
            .||:.::.|..|..|:|.|                  .|..|   :.|:.||..:.....||.|.
  Fly   892 QCGKGFKNTKQLKNHRRLHRTQGLGMGKQSNEQISVGPEGNPVVMHRCEDCGAAFKQKKTLREHL 956

  Fly   409 LTHTGERPYACDLCDKAYYDSSSLRQHKISHTGKKAFTCEICGVGLSQKSGYKKHMMVHSGVKAH 473
            .....|: ..|..|.:.:...||||.|..||...|.|.|:.|....|..:.|::|:..|...|.:
  Fly   957 CKERNEQ-LECPECQRRFGSKSSLRLHLRSHQEHKRFRCDTCDHETSDHNAYRRHLATHKESKRY 1020

  Fly   474 KCDVCGHAFTFTSNLNAHVRLHSGEKP-----FKCEVCVKAFPTKKRLASHMRVHNKESPVTATV 533
            .|..|......::....|::....|:.     :||..|......:..|..|...|:..:......
  Fly  1021 SCPHCDFRAIQSTAFRIHLQTRHPEQELSTIIYKCNQCNFTSINQGLLQVHQAKHDAGNHNQTLA 1085

  Fly   534 AVQSINPPSRQA 545
            :.|...|..:|:
  Fly  1086 SSQGDVPVEKQS 1097

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871
COG5048 <297..451 CDD:227381 46/171 (27%)
C2H2 Zn finger 307..327 CDD:275368 6/21 (29%)
C2H2 Zn finger 335..355 CDD:275368 5/20 (25%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
COG5048 <387..523 CDD:227381 35/143 (24%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
zf-H2C2_2 403..426 CDD:290200 6/22 (27%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 5/19 (26%)
C2H2 Zn finger 475..495 CDD:275368 3/19 (16%)
zf-H2C2_2 487..510 CDD:290200 5/27 (19%)
C2H2 Zn finger 503..523 CDD:275368 4/19 (21%)
CG1233NP_612034.1 C2H2 Zn finger 830..852 CDD:275368 6/21 (29%)
C2H2 Zn finger 861..882 CDD:275368 5/20 (25%)
zf-H2C2_2 875..899 CDD:290200 5/23 (22%)
zf-C2H2 888..910 CDD:278523 7/21 (33%)
C2H2 Zn finger 890..910 CDD:275368 7/19 (37%)
zf-C2H2_2 893..999 CDD:289522 29/106 (27%)
C2H2 Zn finger 939..956 CDD:275368 5/16 (31%)
RPB9 966..1061 CDD:224510 25/94 (27%)
C2H2 Zn finger 966..986 CDD:275368 7/19 (37%)
C2H2 Zn finger 994..1014 CDD:275368 5/19 (26%)
C2H2 Zn finger 1022..1042 CDD:275368 3/19 (16%)
C2H2 Zn finger 1055..1075 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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