DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dwg and Zfp26

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_001102465.2 Gene:Zfp26 / 367033 RGDID:1565847 Length:956 Species:Rattus norvegicus


Alignment Length:650 Identity:170/650 - (26%)
Similarity:263/650 - (40%) Gaps:160/650 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EVVVLNCRTC---TRACKLHKPLQEEIDLGSEGSTTLASMLNYCTGL--------------SFEP 55
            ::..|:|.:.   .:.|.     |||   .:||.:||....:....:              |..|
  Rat     2 DITSLSCESLFSDDQICS-----QEE---ETEGESTLGEDCDKDEAVDCAQEEWTLKDPTQSSRP 58

  Fly    56 QDGAAMPQHICLHCLQLLEQAFNFKRMVIDSDELLRLGLDEARCSSFHESQTHSPNQSQQHDQ-- 118
            .| .|:..|..|...: ||:....|....:.|.|.|                |:..::||.|.  
  Rat    59 GD-VAVEDHTNLATAE-LEKQLQTKDSAPEQDFLAR----------------HTFMETQQVDAVT 105

  Fly   119 -QQQAFDST-EEYVMI---------EMLNEEQENVANLDEELAEE------DRRIFAMTVDEEEE 166
             :..|.|.| ||:..:         |::.|..:|:|.:..:|.:.      :|:: .:|| .|:.
  Rat   106 FEDVAVDFTQEEWTSLDPIQRTLYREVMLENYQNLATVGGQLFKPSLISWLERKV-ELTV-MEQG 168

  Fly   167 FLTE----------EVDQDDELSEEEH--QLAQ--SGDQQEEHITMESVHEFQPAEVEYVTIKNE 217
            .|.|          .:.||...|:..:  ||.:  ||.:..:.|.:.:|.........|::..:.
  Rat   169 ILQEWEMHLKTKRTALQQDRFWSDMSNGMQLGRELSGGELGDSIQVGTVFSEDSCPQTYISTPST 233

  Fly   218 FETIVTE---EDEFEVMNDSGAHDAILDCQMIVIPAEGAID----EVIGEETLELEGDGREEHLL 275
            .:|....   :|....:.::...:.||.....|.|.....|    ....|:::|....|:.  .:
  Rat   234 EDTSACHLRGKDFLPPLKETSTEENILQLNQCVKPLTLTPDVSQRMCTLEKSVECSDCGKT--FV 296

  Fly   276 PEAEDVCEDEDFLEESLDSAPPTAGEAL------------------------------------- 303
            .|.|.........|.:|.. |...|:|.                                     
  Rat   297 NELELQAHSSSHSENNLHK-PEECGQAFTHPVSHDGHVIPTEKKYYECKKCEKFFTHPVYLNIHV 360

  Fly   304 -------PYVCTVCQKAFRQQCRLNQHMRSHVDEKQYECEECGK------RL-KHLRNY------ 348
                   ||.|..|.|||.::..|..|:|.|..||.|||:||||      || :|:|::      
  Rat   361 QSHTVEKPYDCKECGKAFTERSSLIVHLRQHTREKSYECKECGKTFIQPSRLTEHMRSHTGEKPY 425

  Fly   349 ---------------KEHMLTHTNVKPHQCSICGRFYRTTSSLAVHKRTHAEKKPYNCDQCGRGY 398
                           ..|:.|||..||.:|:|||:.:..:|.|..|.|||..:|||.|..||:.:
  Rat   426 QCDQCGNAFASSSYLTTHLRTHTGEKPFECNICGKAFTRSSYLLGHIRTHTGEKPYECKVCGKAF 490

  Fly   399 AAFDHLRRHKLTHTGERPYACDLCDKAYYDSSSLRQHKISHTGKKAFTCEICGVGLSQKSGYKKH 463
            :....|..|...|||||||.|..|:||:...:.|.:|..:|||:|.|.|::|.......|..|.|
  Rat   491 SGRSWLTIHLRKHTGERPYPCTECEKAFTSFAQLTEHIKTHTGEKPFRCKVCARTFRNSSCLKTH 555

  Fly   464 MMVHSGVKAHKCDVCGHAFTFTSNLNAHVRLHSGEKPFKCEVCVKAFPTKKRLASHMRVHNKESP 528
            ..:|:|:|.:||:.||..||..|.|..||.:|:||||::|:.|.|||.|...|..|:|:|..|.|
  Rat   556 FRIHTGIKPYKCNYCGKDFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLVEHIRIHTGEKP 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871 20/93 (22%)
COG5048 <297..451 CDD:227381 69/225 (31%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 10/47 (21%)
C2H2 Zn finger 363..383 CDD:275368 8/19 (42%)
COG5048 <387..523 CDD:227381 58/135 (43%)
C2H2 Zn finger 391..411 CDD:275368 5/19 (26%)
zf-H2C2_2 403..426 CDD:290200 12/22 (55%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 5/19 (26%)
C2H2 Zn finger 475..495 CDD:275368 9/19 (47%)
zf-H2C2_2 487..510 CDD:290200 11/22 (50%)
C2H2 Zn finger 503..523 CDD:275368 9/19 (47%)
Zfp26NP_001102465.2 KRAB 104..162 CDD:214630 11/58 (19%)
C2H2 Zn finger 288..308 CDD:275368 3/21 (14%)
COG5048 338..751 CDD:227381 100/282 (35%)
C2H2 Zn finger 343..363 CDD:275368 0/19 (0%)
C2H2 Zn finger 371..391 CDD:275368 8/19 (42%)
C2H2 Zn finger 399..419 CDD:275368 9/19 (47%)
C2H2 Zn finger 427..447 CDD:275368 1/19 (5%)
C2H2 Zn finger 455..475 CDD:275368 8/19 (42%)
C2H2 Zn finger 483..503 CDD:275368 5/19 (26%)
C2H2 Zn finger 511..531 CDD:275368 6/19 (32%)
C2H2 Zn finger 539..559 CDD:275368 5/19 (26%)
C2H2 Zn finger 567..587 CDD:275368 9/19 (47%)
COG5048 591..>918 CDD:227381 13/29 (45%)
C2H2 Zn finger 595..615 CDD:275368 9/19 (47%)
C2H2 Zn finger 623..643 CDD:275368
C2H2 Zn finger 651..671 CDD:275368
C2H2 Zn finger 679..699 CDD:275368
C2H2 Zn finger 707..727 CDD:275368
C2H2 Zn finger 735..755 CDD:275368
C2H2 Zn finger 763..783 CDD:275368
C2H2 Zn finger 791..811 CDD:275368
C2H2 Zn finger 819..839 CDD:275368
C2H2 Zn finger 847..867 CDD:275368
C2H2 Zn finger 875..895 CDD:275368
C2H2 Zn finger 903..923 CDD:275368
C2H2 Zn finger 931..947 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.