DRSC/TRiP Functional Genomics Resources

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Protein Alignment dwg and Zfp143

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_001012169.2 Gene:Zfp143 / 361627 RGDID:1305662 Length:638 Species:Rattus norvegicus


Alignment Length:458 Identity:111/458 - (24%)
Similarity:181/458 - (39%) Gaps:109/458 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 DELSEEEHQLAQSGDQQEEHITMESVHEFQPAEVEYVTIKN-------------EFETIVTEEDE 227
            |.|..|:.|..|..|.....|...|...:..:.::.|.:::             :.:||:..:.:
  Rat    99 DSLRLEDGQAVQLEDGTTAFIHHTSKDSYDQSSLQAVQLEDGTTAYIHHAVQVPQPDTILAIQAD 163

  Fly   228 FEVMNDSGAH--DAILDCQMIV----------------IPAEGAIDEVIGEETLELEGDGREEHL 274
            ..|   :|.|  ||.:|...|.                :.:.|.|.|...|:.:::...|....:
  Rat   164 GTV---AGLHTGDATIDPDTISALEQYAAKVSIDGSEGVTSTGLIGENEQEKKMQIVLQGHATRV 225

  Fly   275 LPEAEDVCEDEDFLEESLDSAPPTAGEALPYVCTVCQKAFRQQCRLNQHMRSHVDEKQYECEECG 339
            .|:::.                  :||          ||||  |:.               :.||
  Rat   226 TPKSQQ------------------SGE----------KAFR--CKY---------------DGCG 245

  Fly   340 KRLKHLRNYKEHMLTHTNVKPHQC--SICGRFYRTTSSLAVHKRTHAEKKPYNC--DQCGRGYAA 400
            |......:.|.|..:||..:|:||  |.||:.:.|...|..|.|||..:|||.|  |.|.:.:..
  Rat   246 KLYTTAHHLKVHERSHTGDRPYQCEHSGCGKAFATGYGLKSHFRTHTGEKPYRCSEDNCTKSFKT 310

  Fly   401 FDHLRRHKLTHTGERPYACDL--CDKAYYDSSSLRQHKISHTGKKAFTCEI--CGVGLSQKSGYK 461
            ...|::|..|||||||:.|.:  |.:::..|:..:.|..:|||::.:.|..  ||...:..:.||
  Rat   311 SGDLQKHIRTHTGERPFKCPIEGCGRSFTTSNIRKVHIRTHTGERPYYCTEPGCGRAFASATNYK 375

  Fly   462 KHMMVHSGVKAHKCDV--CGHAFTFTSNLNAHVRLHSGEKPFKCEVCVKAFPTKKRLASHMR-VH 523
            .|:.:|:|.|.:.|.|  |...||..|:|..|..:|:..||:.|..|.|.:.....||.|.| .|
  Rat   376 NHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHSKPYNCNHCGKTYKQISTLAMHKRTAH 440

  Fly   524 NKESPVTATVAVQSINPPSRQAGAEGATGGGATGGSPTGGGATGGSATNLHITEVHEQPVSTSKV 588
            |...|:..........||.:                  |.....||... ::|.|..:.:.:::|
  Rat   441 NDTEPIEEEQEAFFEPPPGQ------------------GDDVLKGSQIT-YVTGVEGEDIVSTQV 486

  Fly   589 VMV 591
            ..|
  Rat   487 ATV 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871
COG5048 <297..451 CDD:227381 49/161 (30%)
C2H2 Zn finger 307..327 CDD:275368 5/19 (26%)
C2H2 Zn finger 335..355 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..383 CDD:275368 8/21 (38%)
COG5048 <387..523 CDD:227381 49/144 (34%)
C2H2 Zn finger 391..411 CDD:275368 5/21 (24%)
zf-H2C2_2 403..426 CDD:290200 11/24 (46%)
C2H2 Zn finger 419..439 CDD:275368 4/21 (19%)
C2H2 Zn finger 447..467 CDD:275368 6/21 (29%)
C2H2 Zn finger 475..495 CDD:275368 8/21 (38%)
zf-H2C2_2 487..510 CDD:290200 8/22 (36%)
C2H2 Zn finger 503..523 CDD:275368 7/20 (35%)
Zfp143NP_001012169.2 SFP1 <207..292 CDD:227516 29/129 (22%)
C2H2 Zn finger 239..261 CDD:275368 6/36 (17%)
COG5048 <251..424 CDD:227381 60/172 (35%)
C2H2 Zn finger 269..291 CDD:275368 8/21 (38%)
C2H2 Zn finger 299..321 CDD:275368 5/21 (24%)
C2H2 Zn finger 329..351 CDD:275368 4/21 (19%)
C2H2 Zn finger 359..381 CDD:275368 6/21 (29%)
C2H2 Zn finger 389..411 CDD:275368 8/21 (38%)
C2H2 Zn finger 419..438 CDD:275368 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24384
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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