DRSC/TRiP Functional Genomics Resources

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Protein Alignment dwg and hic2

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_878289.2 Gene:hic2 / 359828 ZFINID:ZDB-GENE-030619-1 Length:560 Species:Danio rerio


Alignment Length:443 Identity:113/443 - (25%)
Similarity:167/443 - (37%) Gaps:97/443 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 LGLDEARCSSFHESQTH--SPNQSQQHDQQQQAFDSTEEYVMIEMLNEEQENVANLDEELAEEDR 154
            ||||.::.|....:.|.  ||:...| :..|.|.:||......    :|..|..||......|  
Zfish   208 LGLDLSKKSPSGSTATEEVSPSSIPQ-ESPQSASESTANSASF----DENPNTQNLTAGEPME-- 265

  Fly   155 RIFAMTVDE-EEEFLTEEVDQ---DDELSEEEHQLAQSGDQQEEHITMESVHEFQPAEVEYVTIK 215
                :.|.| ||.....:|||   ..:::.:..|....|.:.|              ::|.||:.
Zfish   266 ----LGVGECEESQPPPDVDQHKSSRQVTRQRRQPKSEGKKGE--------------DMERVTLP 312

  Fly   216 NEFETIVTEEDEFEVMNDSGAHDAILDCQMIVIPAEGAIDEVIGEETLELEGDGREEHLLPEAED 280
            |.....:....|......:|..:....|:    ..|..::.  |:|..|..|....|.....|..
Zfish   313 NGVSKRLKVAGERLPAGGNGNSEVSFQCK----DEEEGLEN--GQEQSEESGQSENEGGRNSANY 371

  Fly   281 VCEDEDFLEESLDSAPPTAGEALPYVCTVCQKAFRQQCRLNQHMRSHVDEKQYECEECGKRLKHL 345
            |...|.|        .|..|:.| |||..|.|.|.....||.|:.:|.:|:.|..||        
Zfish   372 VYRQEGF--------EPALGDNL-YVCIPCGKGFPSSEELNAHVETHTEEELYIKEE-------- 419

  Fly   346 RNYKEHMLTHTNVKPHQCSICGRFYRTTSSLAVHKRTHAEKKPYNCDQCGRGYAAFDHLRRHKLT 410
                                      ...|........||.......|                .
Zfish   420 --------------------------DNDSYPKEDEVEAEDLSSQITQ----------------V 442

  Fly   411 H-TGERPYACDLCDKAYYDSSSLRQHKISHTGKKAFTCEICGVGLSQKSGYKKHMMVHSGVKAHK 474
            | |..|.::|.:|:|:|.|.::||||:.:|...:.|.|.|||...:|:....:||..|.|:|...
Zfish   443 HGTETRRFSCSVCNKSYKDPATLRQHEKTHWLTRPFPCNICGKMFTQRGTMTRHMRSHLGLKPFA 507

  Fly   475 CDVCGHAFTFTSNLNAHVRLHSGEKPFKCEVCVKAFPTKKRLASHMRVHNKES 527
            |:.||..||....|..|:|:||||||::|::|...|..::.|.||:|:|...|
Zfish   508 CEECGMRFTRQYRLTEHMRVHSGEKPYECQLCGGKFTQQRNLISHLRMHTSPS 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871
COG5048 <297..451 CDD:227381 37/154 (24%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 2/19 (11%)
C2H2 Zn finger 363..383 CDD:275368 1/19 (5%)
COG5048 <387..523 CDD:227381 46/136 (34%)
C2H2 Zn finger 391..411 CDD:275368 1/19 (5%)
zf-H2C2_2 403..426 CDD:290200 6/23 (26%)
C2H2 Zn finger 419..439 CDD:275368 9/19 (47%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
zf-H2C2_2 487..510 CDD:290200 11/22 (50%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
hic2NP_878289.2 BTB 18..118 CDD:279045
BTB 25..120 CDD:197585
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..163
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..367 41/189 (22%)
C2H2 Zn finger 389..409 CDD:275368 7/19 (37%)
zf-C2H2 450..472 CDD:278523 9/21 (43%)
C2H2 Zn finger 452..472 CDD:275368 9/19 (47%)
zf-C2H2 478..500 CDD:278523 8/21 (38%)
C2H2 Zn finger 480..500 CDD:275368 7/19 (37%)
zf-H2C2_2 493..517 CDD:290200 9/23 (39%)
C2H2 Zn finger 508..528 CDD:275368 8/19 (42%)
zf-H2C2_2 521..545 CDD:290200 12/23 (52%)
C2H2 Zn finger 536..556 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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