DRSC/TRiP Functional Genomics Resources

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Protein Alignment dwg and CG1602

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_610291.2 Gene:CG1602 / 35684 FlyBaseID:FBgn0033186 Length:577 Species:Drosophila melanogaster


Alignment Length:542 Identity:110/542 - (20%)
Similarity:181/542 - (33%) Gaps:139/542 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 HESQTHSPNQSQQHDQQQQAFDSTEEYVM--IEMLNEEQENVANLDEELAEEDRRIFAMTVDEEE 165
            |....||..:|.:.|.:....:|||...:  .|...:.:|::...||   ..|.....:.:|...
  Fly    38 HIRNVHSKVRSMEDDFEPVGENSTESGHVDPPEEKPQAEESIFQQDE---SADGACVQLHIDAVR 99

  Fly   166 EFLTEEVDQDDELSEEEHQLAQSGDQQE-----EHITMESVHEFQPA-------EVEYVTIKNEF 218
            ....|..:.|..|..:|.:..|..|..|     .::.....::|.|:       .::::.|..|.
  Fly   100 SSTNETEESDVSLVTDEEESVQDEDPSEPALDDANLKTTPTYKFHPSFFRRDHRTIKFIEIYKEH 164

  Fly   219 ETIVTEEDEFEVMNDSGAHDAILDCQMIVIPAEGAIDEVIGEETLEL-----------------E 266
            ..:...... :........:|:   :.:.|..|..:...:.|..|:|                 .
  Fly   165 PCLWNPAHS-DYKEPKKCKEAL---KRMAIDLEATVSVFLNEMALKLAIKKVHMQFNTVHKRVVS 225

  Fly   267 GDGREEHLLPEAEDVCEDEDFLEESLDSAPPTAGEALP--------------------------- 304
            |..:.:.|......:|   .||..|.|....|..|.:.                           
  Fly   226 GKQKPQSLAFSIYKLC---CFLNASNDEEGATNNEKIKLDFSKKNKLTTDLIEMYANFPQLYDSN 287

  Fly   305 ----------------------------------------------------YVCTVCQKAFRQQ 317
                                                                |..:..:|.:.:.
  Fly   288 HKEFSNMSSRKQAYESMAAEISVPNVDINSDDIFRAIQNLRQWYYKNTKHAIYAGSTAEKFYLEV 352

  Fly   318 CRLNQHMRSHVDEKQYECEECGKRLKHLRNYKEHMLTHTNVKPH-------QCSICGRFYRTTSS 375
            ||.   |.:.:.:::..||.|     |.....:|:|.....|.|       :|::|.|.:.....
  Fly   353 CRF---MPAKMYKQRLVCEFC-----HQITSSDHVLQSHIFKAHNIGELPFKCTLCDRSFVGRCE 409

  Fly   376 LAVH-KRTHAEKKPYNCDQCGRGYAAFDHLRRHKLTHTGERPYACDLCDKAYYDSSSLRQHKIS- 438
            ||.| :|.|. .|.:.|..|.|.:|....|:.|..||||.:||.|:.|.||:...|.:..|..: 
  Fly   410 LANHIQRVHI-GKTHKCTHCERSFAVMSDLQLHIRTHTGHKPYVCEHCGKAFRLRSQMTLHVTAI 473

  Fly   439 HTGKKAFTCEICGVGLSQKSGYKKHMMVHSGVKAHKCDVCGHAFTFTSNLNAHVRLHSGEKPFKC 503
            ||..:||.|.:|.....:|.....|:..|..::...|.|||..||....|..|.::||..|.|.|
  Fly   474 HTKIRAFKCTMCPKDFVKKVDLSDHIKGHLNIRDKICSVCGKGFTSCHALIRHRQIHSEVKKFVC 538

  Fly   504 EVCVKAFPTKKRLASHM-RVHN 524
            ::|...|.....|.:|| |.||
  Fly   539 KLCDSRFSQFVGLNTHMKRTHN 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871
COG5048 <297..451 CDD:227381 47/241 (20%)
C2H2 Zn finger 307..327 CDD:275368 4/19 (21%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 7/20 (35%)
COG5048 <387..523 CDD:227381 47/137 (34%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
zf-H2C2_2 403..426 CDD:290200 11/22 (50%)
C2H2 Zn finger 419..439 CDD:275368 6/20 (30%)
C2H2 Zn finger 447..467 CDD:275368 4/19 (21%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
zf-H2C2_2 487..510 CDD:290200 8/22 (36%)
C2H2 Zn finger 503..523 CDD:275368 7/20 (35%)
CG1602NP_610291.2 GT1 157..244 CDD:304916 11/93 (12%)
MADF_DNA_bdg 273..356 CDD:287510 4/85 (5%)
C2H2 Zn finger 367..388 CDD:275368 7/25 (28%)
C2H2 Zn finger 397..418 CDD:275368 7/20 (35%)
COG5048 <423..554 CDD:227381 43/130 (33%)
C2H2 Zn finger 425..445 CDD:275368 6/19 (32%)
zf-H2C2_2 437..460 CDD:290200 11/22 (50%)
C2H2 Zn finger 453..470 CDD:275368 5/16 (31%)
C2H2 Zn finger 482..502 CDD:275368 4/19 (21%)
C2H2 Zn finger 510..530 CDD:275368 8/19 (42%)
C2H2 Zn finger 538..559 CDD:275368 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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