DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dwg and prg

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_001260253.1 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster


Alignment Length:600 Identity:128/600 - (21%)
Similarity:224/600 - (37%) Gaps:176/600 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VLNCRTC---------------TRACKLHKPLQEEIDLGSEGSTTLASM---LNYCTGLSFEPQD 57
            |..||.|               .:.||       ::.: :|.|.:|.|:   .|.|         
  Fly    14 VSTCRLCHHNTDPNSLNIFDDTVQFCK-------DVSI-AEVSKSLWSVQYDRNEC--------- 61

  Fly    58 GAAMPQHICLHCLQLLEQAFNFKRMVIDSDELLRLGLDEARCSSFHESQTHSPNQSQQHDQQQQA 122
               :.:.||..||::||:||..::.:.:.::.|:..|.|    ...:...|.|..    :.....
  Fly    62 ---LSELICSRCLEILEEAFELRKGMQEREQSLQEQLKE----MIKDHPKHRPGL----NGNPGV 115

  Fly   123 FDSTEEYVMIEMLNEEQENVANLDEELAEEDRRIFAMTVD-EEEEFLTEEVDQDDELSEEEHQLA 186
            |...|..:::|:   :.||:|    |.:||:   ||:..| |.|.:..::.:::::..||:.:..
  Fly   116 FVPEEGCIIVEV---DPENLA----ESSEEE---FALGSDGEYENYDDDDEEEEEDYDEEDEEDG 170

  Fly   187 QSGDQQEEHITMESVHEFQPAEVEYVTIKNEFETIVTEEDEFEVMNDSGAHDAILDCQM----IV 247
            |:|:..:..:.|::.   |.|..:  ::.|...|           .::....|.| ||.    ..
  Fly   171 QNGEDVDMPLGMDAA---QMAAQQ--SVANNANT-----------TEARPKRAFL-CQYCDLGFT 218

  Fly   248 IPAEGAIDEVIGEETLELEGDGREEHLL----PEAEDVCEDEDFLEESLDSAPPTAGEA------ 302
            :|||                  .:||.|    |.|...|   :|....|.:.|......      
  Fly   219 LPAE------------------CQEHELAAHDPNAPYCC---NFCNIKLVTRPALISHIKTLHDP 262

  Fly   303 -LPYVCTVCQKAFRQQCRLNQHMRSHVDEKQYECEECGKRLKHLRNYKEHMLTHTNVKPHQCSIC 366
             .||||..|:|.|.::..|.:|...|...:.:.|..|.|......|..:||..|:.|||..|..|
  Fly   263 DRPYVCAHCRKGFVRRSDLKKHTIVHTGVRPFTCNVCSKSFSRNTNLTKHMRIHSGVKPFVCQQC 327

  Fly   367 GRFYRTTSSLAVHKRTHAEKKPYNCDQCGRGYAAFDHLRRHKLTHT------------------- 412
            .|.::|...:..|.|:|.|.|.:.|.:|...::..|.|..|:..||                   
  Fly   328 PRSFQTAVEMMRHTRSHGEVKAFQCGRCPYSFSRRDKLIAHQQVHTRRDMEQQQQMGLIPPMEGD 392

  Fly   413 -----------------GERPYACDLCDKAYYDSSSLRQHKISHTGKKAFTCEICGVGLSQKSGY 460
                             ..|.|.||:||:.:.....|::|:..|. ...|.|:.|..|.:::...
  Fly   393 LQQQALQAKQKAAAQTKNSRYYHCDVCDRTFQRERDLQRHQALHM-DSLFACKTCNQGFNRREQL 456

  Fly   461 KKHMMVHSGVKAHKCDVCGHAFTFTSNLNAHVRLHSGEKPFKCEVCVKAFPTKKRLASHMRVHNK 525
            ::|.:     :||     |.:||                   |.:|..:|..:..|.:|::||..
  Fly   457 QRHEL-----EAH-----GPSFT-------------------CGICCISFLHQIELENHLKVHQL 492

  Fly   526 ESPVTATVAVQSINP 540
            :..:.......:|.|
  Fly   493 QHKMAQRAQEAAILP 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871 19/94 (20%)
COG5048 <297..451 CDD:227381 47/196 (24%)
C2H2 Zn finger 307..327 CDD:275368 6/19 (32%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
COG5048 <387..523 CDD:227381 32/171 (19%)
C2H2 Zn finger 391..411 CDD:275368 5/19 (26%)
zf-H2C2_2 403..426 CDD:290200 10/58 (17%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 4/19 (21%)
C2H2 Zn finger 475..495 CDD:275368 3/19 (16%)
zf-H2C2_2 487..510 CDD:290200 2/22 (9%)
C2H2 Zn finger 503..523 CDD:275368 5/19 (26%)
prgNP_001260253.1 zf-AD 16..94 CDD:285071 20/97 (21%)
COG5048 <212..340 CDD:227381 36/148 (24%)
C2H2 Zn finger 239..260 CDD:275368 4/23 (17%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
zf-H2C2_2 280..305 CDD:290200 6/24 (25%)
zf-C2H2 294..316 CDD:278523 6/21 (29%)
C2H2 Zn finger 296..316 CDD:275368 6/19 (32%)
zf-H2C2_2 308..331 CDD:290200 10/22 (45%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
C2H2 Zn finger 352..372 CDD:275368 5/19 (26%)
C2H2 Zn finger 416..436 CDD:275368 6/19 (32%)
C2H2 Zn finger 443..464 CDD:275368 4/25 (16%)
C2H2 Zn finger 470..490 CDD:275368 5/19 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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