DRSC/TRiP Functional Genomics Resources

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Protein Alignment dwg and CG17612

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster


Alignment Length:618 Identity:126/618 - (20%)
Similarity:217/618 - (35%) Gaps:187/618 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 MLNYCTGLSFEP----QDGAAMPQHICLHCLQL---------------------LEQAFN----- 78
            |.|.|......|    :.|.::|:.:||.||.:                     ||.:.|     
  Fly     1 MENVCQCCKVRPGLSVKRGGSLPKTLCLQCLHMDTFGTKHKGPRPETQINDKVHLEMSINGEDGL 65

  Fly    79 --------FKRMVIDSDELLRLGLDEAR---------CSSFHESQTHSPNQSQQHDQQQQAF--- 123
                    .:.:|.:.|.|::..:.|..         .|:..:.:.|     :.|.......   
  Fly    66 PEHPLYPEVQLVVKEEDALIKKKVIEENHIHNEEIIGASNIVDVEVH-----ENHRANNDVILIQ 125

  Fly   124 DSTEEYVMIEMLNEEQENVANLD-----EELAEEDRRIFAMTVDEEEE-----FLTEE------- 171
            ||..|.|::|      ::.||.|     :.:|||:..:......|.|:     |:..|       
  Fly   126 DSFAEEVILE------DHPANNDVIIIQDSVAEEELPVIKEEAIEGEDLQGEYFIITECLEEPAI 184

  Fly   172 ------VDQDDELS---EEEHQL---------------AQSGDQQEEHITMESVHEFQPAEVEYV 212
                  ::|.|.|:   ::.||.               .:.||...|:|.:..:.          
  Fly   185 GSCRVCLEQSDNLTNIFDDAHQYGIPIATILSQYTGMPVEKGDSFSEYICVTCLD---------- 239

  Fly   213 TIKNEFETIVTEEDEFEVMNDSGAHDAILDCQMIVIPAEGAIDEV-IGEETLELEGDGREEHLLP 276
            .:||.|:.:.::|:..::...  ..:.|:|           ||.: :..:.::.|..|:..|..|
  Fly   240 VVKNAFDDLESKENTIQMYRQ--PKEEIID-----------IDSIPVKNKPVDYEVTGKPPHRCP 291

  Fly   277 EAEDVCEDEDFL------------EESLDSAPPTAGEALPYVCTVCQKAFRQQCRLNQHMRSH-- 327
            :...:     ||            .|:..:.||.      ..|.:|...:.::..|..||..|  
  Fly   292 QCPKI-----FLLAAKLQAHIRTHNETRTTEPPR------LKCPMCPSIYMKRGCLEAHMWIHRA 345

  Fly   328 VDEKQ------YECEECGKRLKHLRNYKEHMLTHTNV-------KPHQCSICGRFYRTTSSLAVH 379
            .||::      |.|..|.|...:....:.|:.||.:|       ..|:|:.|...:...|||..|
  Fly   346 SDERESELEPPYRCPHCPKLFLYSSFLEIHIQTHEDVSQRLSRKSSHKCAQCADVFSDVSSLKDH 410

  Fly   380 KRTHAEKKPYNCDQCGRGYAAFDHLRRHKLTHTGERPYACDLCDKAYYDSSSLRQH-KISHTGKK 443
            .:.||.::.:.|..|...:....:|:.|...||   .:.|..|.|.:...:.|..| |.|||.|.
  Fly   411 VKIHAGERTFKCPLCLMSFQEESNLKSHDCAHT---RFKCHKCSKFFESQNYLDFHFKKSHTTKG 472

  Fly   444 AFTCEICGVGLSQKSGYKKH---------MMVHSGVKAHKCDVCGHAFTFTSNLNAHVRLHSGEK 499
            .|.|..|.....:::|.|:|         :...|..:...|..|...|:...|...|   |:..|
  Fly   473 PFKCIKCQQTFQKRNGLKEHISSQVCVQFLRSKSPGQIFPCPKCPKKFSIEDNYQMH---HATHK 534

  Fly   500 PFK-------CEVCVKAFPTKKRLASHMRVHNK 525
            ..|       |..|.|::..||.|..|:..||:
  Fly   535 KVKTVIERHNCTQCKKSYQNKKLLTKHILSHNR 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871 16/84 (19%)
COG5048 <297..451 CDD:227381 44/169 (26%)
C2H2 Zn finger 307..327 CDD:275368 5/19 (26%)
C2H2 Zn finger 335..355 CDD:275368 4/19 (21%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
COG5048 <387..523 CDD:227381 38/152 (25%)
C2H2 Zn finger 391..411 CDD:275368 4/19 (21%)
zf-H2C2_2 403..426 CDD:290200 7/22 (32%)
C2H2 Zn finger 419..439 CDD:275368 6/20 (30%)
C2H2 Zn finger 447..467 CDD:275368 5/28 (18%)
C2H2 Zn finger 475..495 CDD:275368 5/19 (26%)
zf-H2C2_2 487..510 CDD:290200 8/29 (28%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
CG17612NP_608824.1 zf-AD 187..>246 CDD:285071 11/68 (16%)
C2H2 Zn finger 290..310 CDD:275368 3/24 (13%)
C2H2 Zn finger 323..343 CDD:275370 5/19 (26%)
zf-C2H2_8 356..438 CDD:292531 20/81 (25%)
C2H2 Zn finger 359..379 CDD:275368 4/19 (21%)
C2H2 Zn finger 394..414 CDD:275368 6/19 (32%)
C2H2 Zn finger 422..438 CDD:275368 3/15 (20%)
C2H2 Zn finger 447..463 CDD:275368 4/15 (27%)
C2H2 Zn finger 476..505 CDD:275368 5/28 (18%)
C2H2 Zn finger 513..533 CDD:275368 6/22 (27%)
C2H2 Zn finger 545..565 CDD:275368 7/19 (37%)
C2H2 Zn finger 568..584 CDD:275368 126/618 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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