DRSC/TRiP Functional Genomics Resources

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Protein Alignment dwg and CG3407

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_608809.1 Gene:CG3407 / 33606 FlyBaseID:FBgn0031573 Length:714 Species:Drosophila melanogaster


Alignment Length:604 Identity:121/604 - (20%)
Similarity:210/604 - (34%) Gaps:184/604 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 IDSDELLRLGLDEARCSSFHESQTH------------SPNQSQQHDQQQQAFDST---------- 126
            :..||.|....:.|.|::..:...|            .|....||...|....|:          
  Fly   110 LHEDEDLLYAHNNASCTNARKVLPHKKRISRKLKGNIDPELDHQHKHVQDVAPSSLYSCEICGYA 174

  Fly   127 --EEYVMIEMLNEEQENVANLDEELAEEDRRIFAMTVDEEEEFLTEEVDQ-----DDELSEEEHQ 184
              .:......|.:..|... |::.|..:|        .:::....|.:|.     .|:|.:|:.:
  Fly   175 VHTQLDFFAHLKQHYEPTV-LEQRLVVQD--------PQQQHQQKEPLDMCGLSAQDKLQQEQAK 230

  Fly   185 LAQSGDQ--QEEHITMESVHEF--QPAEVEYVTIKNEFETIVTEEDEFEVMNDSGAHDAI----- 240
            |    ||  |:..:..|:.|..  ...:|..|.:........|::....|:|.|...:::     
  Fly   231 L----DQVFQDVQLNFENFHNISHHVNDVANVGVNMVLHGQATDKLNAVVVNTSSTPNSVPVVDD 291

  Fly   241 ---LDCQMIVIPAEGAIDEVIGEET------LELEGDGRE------------------------- 271
               .|.:.::......:|:|..|:|      |||...|..                         
  Fly   292 VEFSDTEDMLEGIRNVVDKVSIEDTCDELVDLELTSSGMTAPWFNNNFRDITFPALLLPGEPPPA 356

  Fly   272 ---------------------EHLLPEAED-------------VCEDEDFLEESLDSAPPTAGEA 302
                                 :.|.||..|             .||..   |::|..|||..  .
  Fly   357 SSEPATPLLKENPHVGDHMALDFLSPEKADPQEEAKLEKTLSKACEPN---EQTLLVAPPAC--Q 416

  Fly   303 LPYVCTV------CQKAFRQQCRLNQHMRSHVD------------------EKQYEC-------- 335
            .|.:.||      .::..|....|::..:...|                  |:..||        
  Fly   417 TPPIPTVPPANSSIEQLRRSPLELSEAFKLEEDDMTDSRPASSFEEGDPDAEEPNECFQMEVLDT 481

  Fly   336 ---EECGKRLKHLRNYKEHMLTHTNVKPHQCSICGRFYRTTSSLAVHKRTHAEKKPYNCDQCGRG 397
               ||...:.:               :.|.|..|.|.:.:.::|..|:.||.:::.:.||.|.|.
  Fly   482 SLTEEAENKTR---------------RKHFCDKCNRDFNSYNALKYHQYTHNQERSHKCDSCERS 531

  Fly   398 YAAFDHLRRHKLTHTGERPYACDLCDKAYYDSSSLRQHKIS-HTGKKAFTCEICGVGLSQKSGYK 461
            :.....|:.|:.||:|.:|:.||.|:..:.....|:.|.|| |:..||..||.||...|::....
  Fly   532 FYTQSALKAHERTHSGVKPFKCDKCEFQFRQWGDLKYHIISRHSDVKAHMCEFCGKSFSRRYSLV 596

  Fly   462 KHMMVHSGVKAHKCDVCGHAFTFTSNLNAHVRLHSGEKPFKCEVCVKAFPTKKRLASHMRVHNKE 526
            .|..:|:..|.:.|..|...|..:|.|.:|:::|:||:|::|.:|.|.|.....|..|.|:|:..
  Fly   597 VHRRIHTREKNYACQYCDKTFRASSYLLSHIKVHTGERPYECSICEKKFRVSGDLKRHSRIHDPS 661

  Fly   527 SPVTATVAVQSINPPSRQA 545
                     ::..||:.:|
  Fly   662 ---------RTSQPPAEKA 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871 2/6 (33%)
COG5048 <297..451 CDD:227381 42/189 (22%)
C2H2 Zn finger 307..327 CDD:275368 4/25 (16%)
C2H2 Zn finger 335..355 CDD:275368 3/30 (10%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
COG5048 <387..523 CDD:227381 45/136 (33%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
zf-H2C2_2 403..426 CDD:290200 9/22 (41%)
C2H2 Zn finger 419..439 CDD:275368 7/20 (35%)
C2H2 Zn finger 447..467 CDD:275368 6/19 (32%)
C2H2 Zn finger 475..495 CDD:275368 6/19 (32%)
zf-H2C2_2 487..510 CDD:290200 9/22 (41%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
CG3407NP_608809.1 COG5048 <494..656 CDD:227381 52/161 (32%)
C2H2 Zn finger 497..517 CDD:275368 5/19 (26%)
zf-H2C2_2 509..534 CDD:290200 8/24 (33%)
C2H2 Zn finger 525..545 CDD:275368 6/19 (32%)
zf-H2C2_2 537..562 CDD:290200 9/24 (38%)
C2H2 Zn finger 555..574 CDD:275371 5/18 (28%)
zf-C2H2 580..602 CDD:278523 6/21 (29%)
C2H2 Zn finger 582..602 CDD:275368 6/19 (32%)
zf-H2C2_2 594..617 CDD:290200 5/22 (23%)
C2H2 Zn finger 610..630 CDD:275368 6/19 (32%)
zf-H2C2_2 622..645 CDD:290200 9/22 (41%)
zf-C2H2 636..658 CDD:278523 7/21 (33%)
C2H2 Zn finger 638..658 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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