DRSC/TRiP Functional Genomics Resources

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Protein Alignment dwg and Zfp54

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_001366288.1 Gene:Zfp54 / 22712 MGIID:99201 Length:625 Species:Mus musculus


Alignment Length:231 Identity:88/231 - (38%)
Similarity:126/231 - (54%) Gaps:2/231 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 TAGEALPYVCTVCQKAFRQQCRLNQHMRSHVDEKQYECEECGKRLKHLRNYKEHMLTHTNVKPHQ 362
            ||.|.  |.|..|.|.|.|......|...|..||.|:|.||.:...|...::.|...|:..|.|:
Mouse   334 TAEEC--YSCQYCGKVFHQLSHFKSHFTLHTGEKPYKCNECHRSFPHYVFFRRHKKNHSLQKSHK 396

  Fly   363 CSICGRFYRTTSSLAVHKRTHAEKKPYNCDQCGRGYAAFDHLRRHKLTHTGERPYACDLCDKAYY 427
            |..||:.:...|.|..|.|.|..:|||.|.:|.:.:..:.|||||:..:||::.|.|::|||.:.
Mouse   397 CKECGKSFFILSHLKTHYRIHTGEKPYKCTKCDKLFTQYSHLRRHQRIYTGKKLYRCEVCDKWFT 461

  Fly   428 DSSSLRQHKISHTGKKAFTCEICGVGLSQKSGYKKHMMVHSGVKAHKCDVCGHAFTFTSNLNAHV 492
            .||||.:|:..||..|.:.|:.|.:..:..|..::|..||:|.:.:.|..||.:||..|.|..|.
Mouse   462 LSSSLSRHQKIHTEAKTYKCKDCDIFFNHYSSLRRHQKVHTGERHYTCKQCGKSFTRGSTLRVHQ 526

  Fly   493 RLHSGEKPFKCEVCVKAFPTKKRLASHMRVHNKESP 528
            |:|:||||:||..|.|:|....:|.:|.|||..|.|
Mouse   527 RIHTGEKPYKCSECDKSFTQASQLRTHQRVHTGEKP 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871
COG5048 <297..451 CDD:227381 56/152 (37%)
C2H2 Zn finger 307..327 CDD:275368 6/19 (32%)
C2H2 Zn finger 335..355 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
COG5048 <387..523 CDD:227381 54/135 (40%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
zf-H2C2_2 403..426 CDD:290200 12/22 (55%)
C2H2 Zn finger 419..439 CDD:275368 9/19 (47%)
C2H2 Zn finger 447..467 CDD:275368 4/19 (21%)
C2H2 Zn finger 475..495 CDD:275368 9/19 (47%)
zf-H2C2_2 487..510 CDD:290200 12/22 (55%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
Zfp54NP_001366288.1 KRAB 52..92 CDD:396083
COG5048 138..544 CDD:227381 80/211 (38%)
C2H2 Zn finger 225..245 CDD:275368
C2H2 Zn finger 253..273 CDD:275368
C2H2 Zn finger 285..305 CDD:275368
C2H2 Zn finger 313..333 CDD:275368
C2H2 Zn finger 341..361 CDD:275368 6/19 (32%)
C2H2 Zn finger 397..417 CDD:275368 7/19 (37%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
C2H2 Zn finger 453..473 CDD:275368 9/19 (47%)
C2H2 Zn finger 481..501 CDD:275368 4/19 (21%)
C2H2 Zn finger 509..529 CDD:275368 9/19 (47%)
SFP1 <531..611 CDD:227516 16/32 (50%)
C2H2 Zn finger 537..557 CDD:275368 7/19 (37%)
C2H2 Zn finger 565..585 CDD:275368
C2H2 Zn finger 593..613 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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