DRSC/TRiP Functional Genomics Resources

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Protein Alignment dwg and let-391

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_491744.3 Gene:let-391 / 182953 WormBaseID:WBGene00006492 Length:453 Species:Caenorhabditis elegans


Alignment Length:383 Identity:86/383 - (22%)
Similarity:127/383 - (33%) Gaps:139/383 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 DEVIGEETLELEGDGREEHLLPEAEDVCE--DEDFLEESLDSAPPTAGEALPYVCTVCQKAFRQQ 317
            |.:..|...|...|.::||  .|.|::.:  |..:.::.       ..:.||.|.|         
 Worm    12 DAIFEEWAAECTPDAQKEH--EELEEIVKIPDSTYRKKK-------GNQKLPTVTT--------- 58

  Fly   318 CRLNQHMRSHVDEKQYECEECGKRLKHLRNYKEHMLTHTNVKPHQCSICG-RFYRTTSSLAVHKR 381
                             ||.||..||:.....|||.|||..||::|.||| ||.:.|..:...:.
 Worm    59 -----------------CEVCGVALKYPSRIMEHMRTHTGEKPYECDICGMRFTQRTPMINHFRV 106

  Fly   382 THAEKKPYNCD-QCGRGYAAFDHLRRHKLTHTG------ERPY-------ACDLCDKAYYDSSSL 432
            .|....|:.|: .||:.:........|:|:|.|      .|||       .|...|.....:|:|
 Worm   107 QHMGDLPFLCNFGCGKRFVNNSRRTAHELSHNGLKRAGPARPYLKPVKKIVCPSMDMDILSNSAL 171

  Fly   433 RQH---------------------------------------------KISHT------------ 440
            ..:                                             .||:.            
 Worm   172 ANYISPPTIDSIFQSDPSTSSSSPSQFQSSNQTTKQSIYPSEKEMEKAAISNARIDDVINTVLAR 236

  Fly   441 ------------------GKKAF---------TCEICGVGLSQKSGYKKHMMVHSGVKAHKCDVC 478
                              .|:|:         .|.|||:.|...|....|:..|:|.|..:|..|
 Worm   237 VLAPIDEEIPIEEPEKAPQKRAYISNRRATLAQCNICGLMLKHPSKIADHIRTHTGEKPFECGEC 301

  Fly   479 GHAFTFTSNLNAHV-RLHSGEKPFKCE-VCVKAFPTKKRLASH-MRVHNKESPVTATV 533
            |.:.:..|:|..|: |:|:||:||:|. .|..:|.|......| |.||......|..|
 Worm   302 GLSLSKASSLKVHIRRMHTGERPFECTWRCGLSFVTDSVRKEHEMTVHTGIKRYTCVV 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871
COG5048 <297..451 CDD:227381 47/252 (19%)
C2H2 Zn finger 307..327 CDD:275368 1/19 (5%)
C2H2 Zn finger 335..355 CDD:275368 9/19 (47%)
C2H2 Zn finger 363..383 CDD:275368 7/20 (35%)
COG5048 <387..523 CDD:227381 47/236 (20%)
C2H2 Zn finger 391..411 CDD:275368 5/20 (25%)
zf-H2C2_2 403..426 CDD:290200 9/35 (26%)
C2H2 Zn finger 419..439 CDD:275368 5/64 (8%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 7/20 (35%)
zf-H2C2_2 487..510 CDD:290200 10/24 (42%)
C2H2 Zn finger 503..523 CDD:275368 6/21 (29%)
let-391NP_491744.3 C2H2 Zn finger 59..79 CDD:275368 9/19 (47%)
zf-H2C2_2 73..96 CDD:290200 14/22 (64%)
C2H2 Zn finger 87..108 CDD:275368 7/20 (35%)
C2H2 Zn finger 116..137 CDD:275368 5/20 (25%)
C2H2 Zn finger 270..290 CDD:275368 7/19 (37%)
zf-H2C2_2 286..304 CDD:290200 7/17 (41%)
C2H2 Zn finger 298..319 CDD:275368 7/20 (35%)
C2H2 Zn finger 327..347 CDD:275368 5/19 (26%)
C2H2 Zn finger 357..377 CDD:275368 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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