DRSC/TRiP Functional Genomics Resources

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Protein Alignment dwg and pat-9

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_510680.2 Gene:pat-9 / 181714 WormBaseID:WBGene00003933 Length:470 Species:Caenorhabditis elegans


Alignment Length:207 Identity:52/207 - (25%)
Similarity:75/207 - (36%) Gaps:61/207 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 ERPYACDLCDKAYYDSSSLRQHKISHTGKKAFTCEICGVGLSQKSGYKKHMMVHSGVKAHKCDVC 478
            :|||.|:||...:.....|.:|:.||||:|.|                            :||.|
 Worm    81 KRPYPCNLCSSKFGSKMELEEHQNSHTGQKPF----------------------------ECDTC 117

  Fly   479 GHAFTFTSNLNAHVRLHSGEKPFKCEVCVKAFPTKKRLASHMRVHNKESPVT------------A 531
            ...|...|.|..|.|:||..|||.|.||...|..|..|..|..:|.:::..:            |
 Worm   118 NARFNRRSTLWNHKRIHSDAKPFVCTVCQMTFKWKNSLKCHKDMHQRKNETSAHLDNDLRQLTYA 182

  Fly   532 TVAVQSINPPSRQAGAEGATGGGA----------TGGSPTGGGAT------GGSATNLHITEVH- 579
            |.|.:.:.....:.|...|:...:          |.|:.....|.      ...||.|  ::|| 
 Worm   183 TAAKRKLQMEQEENGGLPASSSASSVISHPLITTTSGNKKRSKAAKAKQTPSSLATTL--SQVHL 245

  Fly   580 --EQPVSTSKVV 589
              .||:..|.:|
 Worm   246 GAVQPLHASALV 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871
COG5048 <297..451 CDD:227381 14/36 (39%)
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368
C2H2 Zn finger 363..383 CDD:275368
COG5048 <387..523 CDD:227381 34/108 (31%)
C2H2 Zn finger 391..411 CDD:275368
zf-H2C2_2 403..426 CDD:290200 6/11 (55%)
C2H2 Zn finger 419..439 CDD:275368 5/19 (26%)
C2H2 Zn finger 447..467 CDD:275368 0/19 (0%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
zf-H2C2_2 487..510 CDD:290200 11/22 (50%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
pat-9NP_510680.2 C2H2 Zn finger 86..106 CDD:275368 5/19 (26%)
zf-H2C2_2 98..123 CDD:290200 12/52 (23%)
C2H2 Zn finger 114..134 CDD:275368 8/19 (42%)
C2H2 Zn finger 142..162 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166841
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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